Specifically-expressed experiments

Gene ID	At5g44420
Gene name	PDF1.2
Functional description	Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
118.8	99.9	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
107.2	99.9	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
104.6	99.9	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
96.2	99.9	GSM39208	RRE2_C2	GSE2169	rre1 and rre2 mutants
92.1	99.9	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
89.6	99.9	ArrayExpress	E-TABM-209-raw-cel-1316546487	-	-	-
86.7	99.9	GSM131166	AtGen_C-16_1-Pi-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
82.9	99.9	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
81.1	99.9	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
80.9	99.9	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
77.9	99.9	GSM131167	AtGen_C-17_2-Pi-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
77.7	99.9	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
73.7	99.9	GSM131168	AtGen_C-18_3-Pi-24_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
73.5	99.9	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
72.4	99.9	GSM131164	AtGen_C-14_2-Pi-12_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
72.0	99.9	GSM131165	AtGen_C-15_3-Pi-12_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
64.6	99.8	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
64.4	99.8	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
64.1	99.8	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
63.9	99.8	ArrayExpress	E-MEXP-883-raw-cel-1697709962	-	-	-
61.1	99.8	ArrayExpress	E-TABM-209-raw-cel-1316546519	-	-	-
60.5	99.8	GSM133733	Buchanan-Wollaston_A-5-bwoll-NG1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
60.4	99.8	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
60.4	99.8	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
60.3	99.8	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
59.6	99.8	GSM133734	Buchanan-Wollaston_A-6-bwoll-NG2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
58.5	99.8	GSM131163	AtGen_C-13_1-Pi-12_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
54.2	99.8	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
52.1	99.8	ArrayExpress	E-TABM-126-raw-cel-1242543065	-	-	-
52.1	99.8	GSM133025	BC181-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
48.1	99.8	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
47.0	99.8	GSM128722	Pieterse_1-8_Abrassicicola-48h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
46.8	99.8	GSM128713	Thorlby_1-2_3h-post-freeze_REP3_ATH1	GSE5524	Gene Expression During Recovery from Freezing
46.5	99.8	ArrayExpress	E-TABM-209-raw-cel-1316546503	-	-	-
46.3	99.8	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
45.8	99.8	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
44.5	99.8	ArrayExpress	E-TABM-209-raw-cel-1316546535	-	-	-
42.2	99.8	ArrayExpress	E-TABM-209-raw-cel-1316546455	-	-	-
39.1	99.8	ArrayExpress	E-TABM-126-raw-cel-1242542665	-	-	-
36.4	99.7	GSM128726	Pieterse_1-12_Foccidentalis-48h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
35.8	99.7	ArrayExpress	E-TABM-209-raw-cel-1316546471	-	-	-
35.3	99.7	GSM157369	Ulker_1-5_WRKY-KO-40_Rep1_ATH1	GSE6830	Group II-A WRKY transcription factors and early leaf senescence (2)
28.6	99.7	ArrayExpress	E-TABM-62-raw-cel-720978074	-	-	-
28.1	99.7	ArrayExpress	E-TABM-52-raw-cel-1583683326	-	-	-
27.4	99.7	ArrayExpress	E-MEXP-1262-raw-cel-1502676096	-	-	-
27.2	99.7	GSM134347	St.Clair_1-8_311_Col-0_0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
26.5	99.7	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
25.9	99.7	ArrayExpress	E-MEXP-883-raw-cel-1697709938	-	-	-
24.9	99.6	GSM133034	CT481-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
24.9	99.6	ArrayExpress	Millenaar_A1_AIR_Rep2_ATH1	-	-	-
24.6	99.6	GSM133807	Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
24.3	99.6	GSM142878	GW001_ATH1_A23-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
23.8	99.6	GSM322548	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
23.8	99.6	GSM133028	BC481-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
23.0	99.6	GSM134344	St.Clair_1-5_325_Col-0_0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
22.6	99.6	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
22.6	99.6	GSM157319	Hammond_3-9_Caesium-treated-shoot_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
22.3	99.6	ArrayExpress	E-TABM-62-raw-cel-720979062	-	-	-
22.0	99.6	ArrayExpress	E-MEXP-1262-raw-cel-1502675762	-	-	-
21.7	99.6	GSM142818	SS002_ATH1_A10-smith-20h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
21.7	99.6	GSM39199	Col_C1	GSE2169	rre1 and rre2 mutants
21.5	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
20.5	99.6	ArrayExpress	Millenaar_A2_ETH_Rep1_ATH1	-	-	-
20.4	99.6	GSM131162	AtGen_C-12_3-Pi-6_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
19.8	99.6	GSM142812	SS002_ATH1_A4-smith-04h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
19.4	99.6	ArrayExpress	E-MEXP-1262-raw-cel-1502676015	-	-	-
19.3	99.6	GSM133806	Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
19.2	99.6	GSM134380	St.Clair_1-41_326b_Est_0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
19.0	99.5	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
18.9	99.5	GSM142819	SS002_ATH1_A11-smith-24h_repeat	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
18.8	99.5	GSM142876	GW001_ATH1_A21-Warre-00f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
18.5	99.5	GSM133026	BC181-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
18.4	99.5	GSM134400	St.Clair_1-97_296_Tsu-1_0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
18.4	99.5	GSM142879	GW001_ATH1_A24-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
18.2	99.5	ArrayExpress	E-TABM-62-raw-cel-720983322	-	-	-
18.2	99.5	ArrayExpress	E-TABM-62-raw-cel-720984337	-	-	-
18.1	99.5	GSM131804	Quick_A12_3-12hr_Rep1_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
17.9	99.5	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
17.6	99.5	ArrayExpress	Millenaar_A5_ETH_Rep3_ATH1	-	-	-
16.9	99.5	GSM128725	Pieterse_1-11_Foccidentalis-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
16.9	99.5	GSM151695	Col-0 uninoculated, biological replicate 2	GSE6556	Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
16.6	99.5	GSM142816	SS002_ATH1_A8-smith-14h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
16.4	99.5	ArrayExpress	E-MEXP-67-raw-cel-323396457	-	-	-
16.0	99.5	GSM134357	St.Clair_1-18_357-2_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
15.6	99.5	GSM258000	Phloem exudate_2	GSE10247	Transcriptome analysis of the Arabidopsis phloem
15.6	99.5	GSM268250	dor-ck-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
15.3	99.4	GSM142813	SS002_ATH1_A5-smith-08h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
15.0	99.4	GSM142811	SS002_ATH1_A3-smith-02h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
15.0	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
14.8	99.4	ArrayExpress	E-MEXP-883-raw-cel-1697709994	-	-	-
14.5	99.4	GSM134343	St.Clair_1-4_284b_Col-0_0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
14.4	99.4	ArrayExpress	E-TABM-126-raw-cel-1242543481	-	-	-
14.4	99.4	ArrayExpress	E-TABM-62-raw-cel-720979661	-	-	-
14.3	99.4	ArrayExpress	E-TABM-62-raw-cel-720978971	-	-	-
14.3	99.4	ArrayExpress	E-TABM-62-raw-cel-720983372	-	-	-
14.2	99.4	GSM133295	NO.32	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
14.1	99.4	GSM133299	NO.15	GSE5699	AtGenExpress: ARR21C overexpression
14.0	99.4	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
14.0	99.4	GSM133099	JD AT+EO COL WT EXP2 24H INFECTED	GSE5686	AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection
13.9	99.4	ArrayExpress	E-TABM-52-raw-cel-1583682926	-	-	-
13.7	99.4	GSM133294	NO.31	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
13.2	99.4	GSM131161	AtGen_C-11_2-Pi-6_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
13.2	99.4	ArrayExpress	E-TABM-62-raw-cel-720983525	-	-	-
13.0	99.4	ArrayExpress	E-TABM-62-raw-cel-720976159	-	-	-
12.9	99.3	ArrayExpress	E-TABM-52-raw-cel-1583682862	-	-	-
12.9	99.3	GSM133296	NO.33	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
12.7	99.3	GSM133287	NO.12	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
12.7	99.3	GSM157317	Hammond_3-7_Control-shoot_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
11.9	99.3	ArrayExpress	E-TABM-62-raw-cel-720984112	-	-	-
11.9	99.3	GSM133298	NO.14	GSE5699	AtGenExpress: ARR21C overexpression
11.9	99.3	GSM268251	WT-drought-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
11.8	99.3	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
11.6	99.3	GSM133285	NO.10	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
11.3	99.3	GSM142809	SS002_ATH1_A1-smith-00h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
11.3	99.3	GSM133297	NO.13	GSE5699	AtGenExpress: ARR21C overexpression
11.1	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173273005	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-1262-raw-cel-1502676166	-	-	-
10.8	99.2	ArrayExpress	E-MEXP-1262-raw-cel-1502675618	-	-	-
10.7	99.2	ArrayExpress	E-TABM-62-raw-cel-720982833	-	-	-
10.7	99.2	ArrayExpress	E-TABM-126-raw-cel-1242542201	-	-	-
10.7	99.2	GSM131160	AtGen_C-10_1-Pi-6_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
10.6	99.2	GSM133286	NO.11	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
10.3	99.2	GSM157368	Ulker_1-4_WRKY-KO-54_Rep1_ATH1	GSE6830	Group II-A WRKY transcription factors and early leaf senescence (2)
9.6	99.1	GSM142817	SS002_ATH1_A9-smith-16h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.6	99.1	GSM157385	Sakakibara_1-4_TZ-treatment-mutant_Rep1_ATH1	GSE6832	Cytokinin treatment on aerial parts of seedlings
9.4	99.1	GSM105203	Col-LUC_WT_no treatment_Rep1	GSE4662	STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress tolerance
9.4	99.1	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.3	99.1	GSM131157	AtGen_C-7_1-C-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
8.8	99.0	ArrayExpress	E-MEXP-807-raw-cel-1173273032	-	-	-
8.6	99.0	GSM157318	Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
8.6	99.0	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant

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