Specifically-expressed experiments

Gene ID	At5g42590
Gene name	CYP71A16
Functional description	putative cytochrome P450

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
172.7	100.0	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
164.3	99.9	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
138.7	99.9	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
138.3	99.9	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
132.8	99.9	GSM266669	Arabidopsis, root cells, cortex, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
122.1	99.9	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
121.4	99.9	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
106.7	99.9	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
106.6	99.9	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
105.2	99.9	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
100.2	99.9	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
98.8	99.9	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
92.5	99.9	GSM184913	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
84.9	99.9	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
83.6	99.9	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
82.6	99.9	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
70.0	99.9	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
69.8	99.9	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
58.0	99.8	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
55.3	99.8	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
50.4	99.8	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
50.3	99.8	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
42.6	99.8	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
40.5	99.8	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
40.1	99.8	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
39.6	99.8	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
38.6	99.8	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
37.6	99.7	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
36.0	99.7	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
35.6	99.7	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
35.6	99.7	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
33.9	99.7	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
32.3	99.7	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
32.2	99.7	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
32.1	99.7	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
31.8	99.7	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
31.6	99.7	GSM291024	root - 08% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
29.7	99.7	GSM184915	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
29.1	99.7	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
28.2	99.7	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
27.7	99.7	GSM265423	Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
27.3	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
27.0	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
26.5	99.7	GSM184903	Arabidopsis, root cells, stele, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
26.2	99.7	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.1	99.6	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
22.7	99.6	GSM231197	wild-type at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
22.3	99.6	GSM231200	chl1 at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
21.4	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
20.2	99.6	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
20.0	99.6	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
19.1	99.6	GSM27365	lec1-1 Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
18.2	99.5	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
18.2	99.5	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.6	99.5	GSM133807	Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
16.8	99.5	GSM231203	chl1 at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
16.1	99.5	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
15.8	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
15.6	99.5	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
15.5	99.5	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
15.0	99.4	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
14.9	99.4	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
14.7	99.4	GSM131567	ATGE_95_A	GSE5631	AtGenExpress: Developmental series (roots)
14.1	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
13.9	99.4	ArrayExpress	E-MEXP-1468-raw-cel-1591138985	-	-	-
13.8	99.4	GSM9585	arf19-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
13.8	99.4	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
13.8	99.4	GSM260883	Yap_A2-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
13.6	99.4	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
13.0	99.4	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.8	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243239	-	-	-
12.8	99.3	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.8	99.3	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
12.4	99.3	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
12.2	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
12.0	99.3	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
12.0	99.3	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
11.7	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243048	-	-	-
11.7	99.3	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
11.7	99.3	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
11.3	99.3	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.2	99.2	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
11.1	99.2	GSM266672	Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.0	99.2	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
10.9	99.2	GSM290760	root - 04% oxygen - 2h - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.9	99.2	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.8	99.2	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
10.8	99.2	GSM27361	WT Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
10.7	99.2	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
10.5	99.2	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.4	99.2	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.4	99.2	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.4	99.2	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
10.1	99.2	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.1	99.2	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.0	99.2	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
10.0	99.2	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.9	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591139018	-	-	-
9.9	99.1	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.8	99.1	GSM9579	nph4-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
9.7	99.1	GSM9577	nph4-1_control_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
9.7	99.1	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
9.6	99.1	GSM133138	S1500_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
9.1	99.1	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.1	99.1	GSM291099	root - 21% oxygen - 2h - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.0	99.1	GSM133137	S1500_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.9	99.0	GSM291019	root - 08% oxygen - 2h - C	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants

Back to the CoP portal site

Back to the KAGIANA project homepage