Specifically-expressed experiments

Gene ID At5g39670
Gene name calcium-binding EF hand family protein
Functional description F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
71.499.9ArrayExpressE-MEXP-807-raw-cel-1173273144---
62.899.8ArrayExpressE-MEXP-807-raw-cel-1173273116---
61.599.8ArrayExpressE-MEXP-807-raw-cel-1173273196---
53.599.8ArrayExpressE-MEXP-807-raw-cel-1173273088---
53.499.8ArrayExpressE-MEXP-807-raw-cel-1173273252---
51.699.8ArrayExpressE-MEXP-807-raw-cel-1173273170---
50.799.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
48.999.8GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
48.799.8ArrayExpressE-MEXP-509-raw-cel-829148666---
46.299.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
45.299.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
44.699.8GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
44.299.8ArrayExpressE-MEXP-807-raw-cel-1173273060---
37.499.7GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
35.699.7GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
35.099.7GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
34.899.7GSM131273AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
33.499.7ArrayExpressE-MEXP-546-raw-cel-863289586---
33.199.7GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
31.299.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.199.7GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
30.999.7GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
30.899.7GSM269496mkk1/mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
30.799.7GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
29.899.7GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
29.799.7GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
28.699.7GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
28.499.7GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
28.199.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
27.799.7GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
27.299.7GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
27.199.7GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.899.7GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
26.599.7GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
26.399.7ArrayExpressE-MEXP-807-raw-cel-1173273223---
25.799.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
25.399.6GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
24.899.6ArrayExpressE-MEXP-173-raw-cel-357965520---
24.899.6GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
23.499.6GSM1330372508GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
23.399.6GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
23.399.6GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
22.599.6GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
21.699.6GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
21.599.6GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
21.599.6ArrayExpressE-MEXP-509-raw-cel-829148385---
21.499.6GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
20.699.6GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
20.599.6GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
19.999.6GSM264764paraquat 20mM 1hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
19.999.6ArrayExpressE-MEXP-739-raw-cel-1099467330---
19.699.6ArrayExpressE-ATMX-34-raw-cel-1563627275---
19.299.6ArrayExpressE-MEXP-546-raw-cel-863289424---
17.999.5GSM1330462788GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
17.999.5GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
17.699.5GSM157312Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
17.499.5GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
17.299.5GSM264762Tween 0.1% 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
16.699.5ArrayExpressE-MEXP-509-raw-cel-829148090---
15.799.5GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
15.799.5ArrayExpressE-MEXP-828-raw-cel-1156922342---
15.299.4GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.299.4ArrayExpressE-MEXP-807-raw-cel-1173273032---
14.799.4GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
14.599.4ArrayExpressE-MEXP-807-raw-cel-1173272921---
14.399.4ArrayExpressE-MEXP-711-raw-cel-1563002902---
14.299.4ArrayExpressE-MEXP-739-raw-cel-1099467321---
14.199.4GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
14.099.4GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.999.4ArrayExpressE-MEXP-174-raw-cel-357966600---
13.899.4GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
13.799.4GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
13.799.4GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
13.699.4GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
13.499.4GSM157318Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
13.299.4ArrayExpressE-MEXP-739-raw-cel-1099467339---
13.299.4GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
13.199.4GSM131314AtGen_6-3222_Saltstress-Roots-1.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
13.099.4GSM157321Hammond_3-14_Potassium-starved-shoot_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
13.099.4ArrayExpressE-ATMX-34-raw-cel-1563627293---
12.999.3GSM149817SLWF infested arabidopsis rosette tissue, replicate 2GSE6516Silverleaf whitefly 2nd instar feeding on 7-week old Arabidopsis thaliana rosette leavesLink to GEO
12.899.3GSM1330642528GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
12.899.3GSM131313AtGen_6-3221_Saltstress-Roots-1.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.899.3GSM269497mkk1/mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
12.899.3GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
12.799.3ArrayExpressE-MEXP-739-raw-cel-1099467303---
12.799.3GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
12.699.3GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
12.599.3GSM131269AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
12.399.3GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
12.399.3ArrayExpressE-MEXP-546-raw-cel-863289404---
12.399.3GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
12.299.3GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
12.299.3GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
12.099.3GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
11.899.3ArrayExpressE-MEXP-509-raw-cel-829148420---
11.899.3GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
11.799.3GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.699.3GSM131274AtGen_6-1422_Cold(4°C)-Roots-6.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.599.3GSM48122Col_8mer1GSE2538Chitin Oligomer ExperimentLink to GEO
11.499.3GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.499.3GSM264761Tween 0.1% 1hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
11.499.3GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.399.3GSM1330612511GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
11.299.2GSM131065Hammond_2-6_pho1mutant_Rep3_ATH1GSE5611Differential gene expression patterns in the phosphate deficient mutant, pho 1Link to GEO
11.199.2GSM1330452787GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
11.099.2GSM264765paraquat 20mM 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
11.099.2GSM131389AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.099.2GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.099.2GSM231204chl1 at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
11.099.2GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.999.2GSM48123Col_8mer2GSE2538Chitin Oligomer ExperimentLink to GEO
10.999.2GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.699.2GSM1330632526GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.699.2GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
10.699.2GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
10.599.2GSM269498mkk1/mkk2, 24h after BTH, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
10.599.2GSM260955A2-LLOYD-PHO_REP2GSE10326Transcriptome analysis of pho3Link to GEO
10.599.2GSM1330412525GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.499.2GSM142895MW001_ATH1_A3-Wheel-a14_repeatGSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
10.399.2ArrayExpressE-MEXP-546-raw-cel-863289532---
10.299.2GSM269499mkk1/mkk2, 24h after BTH, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
10.299.2GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.199.2ArrayExpressE-MEXP-1443-raw-cel-1581869921---
10.199.2ArrayExpressE-MEXP-739-raw-cel-1099467240---
10.099.2GSM133783Brueggemann_A-1-Brueg-uvb_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic StressLink to GEO
10.099.2ArrayExpressE-MEXP-739-raw-cel-1099467249---
10.099.2GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.999.1GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.999.1ArrayExpressE-MEXP-546-raw-cel-863289476---
9.999.1ArrayExpressE-TABM-52-raw-cel-1583683470---
9.899.1ArrayExpressE-MEXP-1454-raw-cel-1585857925---
9.899.1GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.899.1GSM131390AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467312---
9.699.1ArrayExpressE-MEXP-547-raw-cel-863346403---
9.599.1ArrayExpressE-MEXP-711-raw-cel-1563002768---
9.599.1GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.599.1GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.499.1GSM1330512793GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.399.1ArrayExpressE-MEXP-1454-raw-cel-1585857961---
9.399.1GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
9.299.1GSM1330502791GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.099.1GSM131370AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
8.999.0GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.999.0GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.899.0ArrayExpressE-MEXP-739-raw-cel-1099467267---
8.899.0GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
8.899.0GSM131385AtGen_6-7721_UV-Bstress-Roots-0.25h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
8.799.0ArrayExpressE-MEXP-509-raw-cel-829148129---
8.799.0GSM142843MG001_ATH1_A24-Torres-7N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.699.0GSM275642flu_60minGSE10876Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastidsLink to GEO
8.699.0GSM131369AtGen_6-5321_Genotoxicstress-Roots-3.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO



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