Specifically-expressed experiments

Gene ID At5g39510
Gene name SGR4 (SHOOT GRAVITROPSIM 4)
Functional description Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.7GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
6.798.7GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
6.198.5GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
6.198.5ArrayExpressE-MEXP-1443-raw-cel-1581869515---
6.098.5GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
5.998.5GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
5.498.3GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
5.398.3ArrayExpressE-MEXP-509-raw-cel-829148666---
5.298.2GSM184932Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
5.098.1GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
4.898.0GSM157331Coates_1-3_Col-3_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
4.798.0GSM184928Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
4.697.9GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
4.697.9GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
4.697.9GSM184927Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
4.697.9GSM142883CW001_ATH1_A1.2-WestC-wsbGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
4.697.9GSM231201chl1 at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
4.697.9GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
4.597.8GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
4.597.8GSM179967Arabidopsis aux1 mutant roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO



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