Specifically-expressed experiments

Gene ID At5g38020
Gene name S-adenosyl-L-methionine:carboxyl methyltransferase family protein
Functional description encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
99.899.9GSM237281Root control rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
97.999.9GSM237280Root control rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
92.699.9ArrayExpressE-MEXP-791-raw-cel-1122937614---
89.599.9ArrayExpressE-MEXP-791-raw-cel-1122937596---
88.099.9ArrayExpressE-MEXP-791-raw-cel-1122937578---
86.099.9GSM291023root - 08% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
81.499.9GSM133719Deeken_A-1-Deeke-Tum_SLD_REP1GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
80.299.9ArrayExpressE-MEXP-791-raw-cel-1122937623---
77.399.9GSM291114root - 21% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
71.699.9ArrayExpressE-MEXP-791-raw-cel-1122937587---
66.999.8GSM237283Root Selenate rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
57.099.8GSM237282Root Selenate rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
52.099.8ArrayExpressE-MEXP-791-raw-cel-1122937605---
51.899.8GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
50.199.8GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
47.599.8GSM27365lec1-1 RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
45.499.8GSM131066Edwards_1-1_26hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
41.199.8GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
39.299.8GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
38.999.8GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
38.999.8GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
36.299.7GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
35.999.7GSM290825root - 04% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
34.799.7GSM133717Urwin_A-1-Urwin-Con_SLDGSE5724Plant gene expression associated with susceptibility to nematodesLink to GEO
33.899.7GSM133121S0_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
33.399.7GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
32.299.7GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
32.099.7GSM133122S0_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
30.899.7GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
30.699.7GSM142726CH001_ATH1_A005-Hampt-wsb_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
30.499.7GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
30.099.7GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
29.899.7GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
28.799.7GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
28.599.7GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
27.599.7GSM290757root - 01% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
25.899.7GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
25.899.7ArrayExpressE-MEXP-722-raw-cel-1062243048---
25.599.7GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
25.499.6GSM133133S1500_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
25.499.6GSM291113root - 21% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
25.099.6ArrayExpressE-MEXP-722-raw-cel-1062243429---
24.599.6GSM133721Deeken_A-1-Deeke-Tum_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
24.399.6GSM142721CH001_ATH1_A001-Hampt-wsaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
24.299.6GSM142882CW001_ATH1_A1.1-WestC-wsuGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
23.399.6GSM142727CH001_ATH1_A006-Hampt-akbGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
22.999.6GSM131078Edwards_1-13_74hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
22.699.6GSM131571ATGE_98_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
22.499.6GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
22.199.6GSM133129S0_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
22.199.6ArrayExpressE-MEXP-722-raw-cel-1062242857---
20.599.6GSM133134S1500_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
20.299.6GSM157314Hammond_3-4_Control-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
20.199.6GSM133135S1500_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
20.099.6GSM128746Edwards_3-2_fri-flc1_Rep1_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
20.099.6GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
19.999.6GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
19.799.6GSM131071Edwards_1-6_46hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
19.699.6GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
19.599.6GSM133130S0_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
19.499.6GSM142733CH001_ATH1_A012-Hampt-c1cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
19.399.6GSM133142S1500_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
19.099.5ArrayExpressE-MEXP-722-raw-cel-1062242948---
18.999.5GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
18.999.5GSM133123S0_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
18.899.5GSM131073Edwards_1-8_54hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
18.799.5GSM133124S0_24H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
18.399.5GSM142885CW001_ATH1_A1.4-WestC-kubGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
18.399.5GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
18.299.5GSM133277RIKEN-GODA1A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
17.899.5GSM157339Coates_1-11_Col-3_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
17.799.5GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
17.799.5GSM128748Edwards_3-4_fri-flc2_Rep2_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
17.499.5GSM131354AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
16.999.5GSM131076Edwards_1-11_66hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
16.899.5GSM131070Edwards_1-5_42hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
16.799.5GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
16.799.5GSM131069Edwards_1-4_38hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
16.699.5GSM133278RIKEN-GODA1B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
16.499.5GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
16.299.5GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
16.099.5GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
15.999.5GSM142883CW001_ATH1_A1.2-WestC-wsbGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
15.999.5GSM133141S1500_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
15.899.5GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
15.699.5GSM207292Seedling_ConstantWhiteLight_48hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
15.099.4ArrayExpressE-MEXP-722-raw-cel-1062243183---
14.999.4GSM131074Edwards_1-9_58hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
14.899.4GSM133125S0_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.799.4GSM133127S0_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.699.4GSM133128S0_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.699.4GSM291019root - 08% oxygen - 2h - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
14.599.4GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
14.499.4GSM142669SF002_ATH1_A7-Fille-ANGR4-12nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
14.399.4ArrayExpressE-MEXP-722-raw-cel-1062243470---
13.999.4GSM131389AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
13.999.4GSM207293Seedling_ConstantWhiteLight_52hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
13.799.4ArrayExpressE-MEXP-722-raw-cel-1062243559---
13.499.4GSM131075Edwards_1-10_62hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
13.299.4GSM131564ATGE_94_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
12.599.3GSM291112root - 21% oxygen - 30min - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.499.3GSM128747Edwards_3-3_FRI-FLC-wt2_Rep2_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
12.499.3GSM133136S1500_24H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.399.3GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
12.299.3GSM131072Edwards_1-7_50hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
12.299.3GSM128745Edwards_3-1_FRI-FLC-wt1_Rep1_ATH1GSE5528Identifying targets of FLC at 27oCLink to GEO
12.299.3GSM131350AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.199.3GSM207287Seedling_ConstantWhiteLight_28hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
12.099.3GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
12.099.3GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
12.099.3GSM291021root - 08% oxygen - 30min - CGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.999.3GSM131077Edwards_1-12_70hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
11.899.3GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.899.3GSM231199chl1 at T0, biological rep1GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
11.699.3GSM291101root - 21% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.399.3GSM142784HO001_ATH1_A1-Okamo-gpal-ABAGSE6171Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABALink to GEO
11.399.3GSM131390AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.299.2GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.299.2GSM290756root - 01% oxygen - 30min - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.299.2GSM290762root - 04% oxygen - 30min - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.199.2GSM131357AtGen_6-4621_Droughtstress-Roots-24.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
10.999.2GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
10.899.2GSM207297Seedling_ConstantWhiteLight_68hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
10.899.2GSM131566ATGE_94_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.799.2GSM133140S1500_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.699.2GSM291020root - 08% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.699.2GSM131565ATGE_94_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.599.2GSM133126S0_2H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.599.2GSM133718Urwin_A-2-Urwin-Inf_SLDGSE5724Plant gene expression associated with susceptibility to nematodesLink to GEO
10.599.2GSM157337Coates_1-9_Col-0_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.499.2GSM131067Edwards_1-2_30hr_Rep1_ATH1GSE5612Circadian expression of genes: modelling the Arabidopsis circadian clockLink to GEO
9.999.1GSM157325Hammond_3-18_Caesium-treated-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
9.999.1ArrayExpressE-MEXP-722-raw-cel-1062243239---
9.899.1GSM207296Seedling_ConstantWhiteLight_64hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
9.799.1GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
9.799.1GSM290759root - 01% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.699.1GSM260881Yap_A2-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
9.599.1GSM231202chl1 at T0.5, biological rep1GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.599.1GSM291108root - 21% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.499.1GSM290761root - 04% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.399.1GSM207295Seedling_ConstantWhiteLight_60hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
9.399.1GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.399.1GSM207291Seedling_ConstantWhiteLight_44hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
9.299.1ArrayExpressE-MEXP-443-raw-cel-669122927---
9.299.1GSM231193wild-type at T0, biological rep1GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.299.1GSM231200chl1 at T0, biological rep2GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.199.1GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.199.1GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.199.1GSM133280RIKEN-GODA2B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
9.099.1GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.099.1GSM131645ATGE_2_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.899.0GSM131643ATGE_2_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.799.0GSM207290Seedling_ConstantWhiteLight_40hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.Link to GEO
8.799.0GSM131644ATGE_2_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO



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