Specifically-expressed experiments

Gene ID	At5g38020
Gene name	S-adenosyl-L-methionine:carboxyl methyltransferase family protein
Functional description	encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
99.8	99.9	GSM237281	Root control rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
97.9	99.9	GSM237280	Root control rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
92.6	99.9	ArrayExpress	E-MEXP-791-raw-cel-1122937614	-	-	-
89.5	99.9	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
88.0	99.9	ArrayExpress	E-MEXP-791-raw-cel-1122937578	-	-	-
86.0	99.9	GSM291023	root - 08% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
81.4	99.9	GSM133719	Deeken_A-1-Deeke-Tum_SLD_REP1	GSE5725	Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
80.2	99.9	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
77.3	99.9	GSM291114	root - 21% oxygen - 30min - G	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
71.6	99.9	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
66.9	99.8	GSM237283	Root Selenate rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
57.0	99.8	GSM237282	Root Selenate rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
52.0	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
51.8	99.8	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
50.1	99.8	GSM291024	root - 08% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
47.5	99.8	GSM27365	lec1-1 Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
45.4	99.8	GSM131066	Edwards_1-1_26hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
41.1	99.8	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
39.2	99.8	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
38.9	99.8	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
38.9	99.8	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
36.2	99.7	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
35.9	99.7	GSM290825	root - 04% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
34.7	99.7	GSM133717	Urwin_A-1-Urwin-Con_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
33.8	99.7	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
33.3	99.7	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
32.2	99.7	GSM131567	ATGE_95_A	GSE5631	AtGenExpress: Developmental series (roots)
32.0	99.7	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
30.8	99.7	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
30.6	99.7	GSM142726	CH001_ATH1_A005-Hampt-wsb_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
30.4	99.7	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
30.0	99.7	GSM131563	ATGE_93_C	GSE5631	AtGenExpress: Developmental series (roots)
29.8	99.7	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
28.7	99.7	GSM131561	ATGE_93_A	GSE5631	AtGenExpress: Developmental series (roots)
28.5	99.7	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
27.5	99.7	GSM290757	root - 01% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
25.8	99.7	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
25.8	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243048	-	-	-
25.5	99.7	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
25.4	99.6	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
25.4	99.6	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
25.0	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
24.5	99.6	GSM133721	Deeken_A-1-Deeke-Tum_SLD_REP2	GSE5725	Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
24.3	99.6	GSM142721	CH001_ATH1_A001-Hampt-wsa	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
24.2	99.6	GSM142882	CW001_ATH1_A1.1-WestC-wsu	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
23.3	99.6	GSM142727	CH001_ATH1_A006-Hampt-akb	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
22.9	99.6	GSM131078	Edwards_1-13_74hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
22.6	99.6	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
22.4	99.6	GSM131562	ATGE_93_B	GSE5631	AtGenExpress: Developmental series (roots)
22.1	99.6	GSM133129	S0_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
22.1	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
20.5	99.6	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
20.2	99.6	GSM157314	Hammond_3-4_Control-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
20.1	99.6	GSM133135	S1500_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
20.0	99.6	GSM128746	Edwards_3-2_fri-flc1_Rep1_ATH1	GSE5528	Identifying targets of FLC at 27oC
20.0	99.6	GSM27361	WT Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
19.9	99.6	GSM157327	Hammond_3-11_Potassium-starved-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
19.7	99.6	GSM131071	Edwards_1-6_46hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
19.6	99.6	GSM290758	root - 01% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
19.5	99.6	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
19.4	99.6	GSM142733	CH001_ATH1_A012-Hampt-c1c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
19.3	99.6	GSM133142	S1500_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
19.0	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
18.9	99.5	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
18.9	99.5	GSM133123	S0_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
18.8	99.5	GSM131073	Edwards_1-8_54hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
18.7	99.5	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
18.3	99.5	GSM142885	CW001_ATH1_A1.4-WestC-kub	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
18.3	99.5	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
18.2	99.5	GSM133277	RIKEN-GODA1A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
17.8	99.5	GSM157339	Coates_1-11_Col-3_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
17.7	99.5	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
17.7	99.5	GSM128748	Edwards_3-4_fri-flc2_Rep2_ATH1	GSE5528	Identifying targets of FLC at 27oC
17.4	99.5	GSM131354	AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
16.9	99.5	GSM131076	Edwards_1-11_66hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
16.8	99.5	GSM131070	Edwards_1-5_42hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
16.7	99.5	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
16.7	99.5	GSM131069	Edwards_1-4_38hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
16.6	99.5	GSM133278	RIKEN-GODA1B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
16.4	99.5	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
16.2	99.5	GSM142730	CH001_ATH1_A009-Hampt-wsc_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
16.0	99.5	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
15.9	99.5	GSM142883	CW001_ATH1_A1.2-WestC-wsb	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
15.9	99.5	GSM133141	S1500_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
15.8	99.5	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
15.6	99.5	GSM207292	Seedling_ConstantWhiteLight_48hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
15.0	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
14.9	99.4	GSM131074	Edwards_1-9_58hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
14.8	99.4	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.7	99.4	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.6	99.4	GSM133128	S0_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
14.6	99.4	GSM291019	root - 08% oxygen - 2h - C	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.5	99.4	GSM142675	SF002_ATH1_A6-Fille-WT+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
14.4	99.4	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
14.3	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
13.9	99.4	GSM131389	AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
13.9	99.4	GSM207293	Seedling_ConstantWhiteLight_52hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
13.7	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
13.4	99.4	GSM131075	Edwards_1-10_62hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
13.2	99.4	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
12.5	99.3	GSM291112	root - 21% oxygen - 30min - C	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.4	99.3	GSM128747	Edwards_3-3_FRI-FLC-wt2_Rep2_ATH1	GSE5528	Identifying targets of FLC at 27oC
12.4	99.3	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
12.3	99.3	GSM142674	SF002_ATH1_A5-Fille-WTnodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
12.2	99.3	GSM131072	Edwards_1-7_50hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
12.2	99.3	GSM128745	Edwards_3-1_FRI-FLC-wt1_Rep1_ATH1	GSE5528	Identifying targets of FLC at 27oC
12.2	99.3	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
12.1	99.3	GSM207287	Seedling_ConstantWhiteLight_28hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
12.0	99.3	GSM157338	Coates_1-10_ara1OX_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
12.0	99.3	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
12.0	99.3	GSM291021	root - 08% oxygen - 30min - C	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.9	99.3	GSM131077	Edwards_1-12_70hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
11.8	99.3	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.8	99.3	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.6	99.3	GSM291101	root - 21% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.3	99.3	GSM142784	HO001_ATH1_A1-Okamo-gpal-ABA	GSE6171	Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABA
11.3	99.3	GSM131390	AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
11.2	99.2	GSM133137	S1500_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.2	99.2	GSM290756	root - 01% oxygen - 30min - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.2	99.2	GSM290762	root - 04% oxygen - 30min - D	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.1	99.2	GSM131357	AtGen_6-4621_Droughtstress-Roots-24.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
10.9	99.2	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.8	99.2	GSM207297	Seedling_ConstantWhiteLight_68hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
10.8	99.2	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
10.7	99.2	GSM133140	S1500_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.6	99.2	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.6	99.2	GSM131565	ATGE_94_B	GSE5631	AtGenExpress: Developmental series (roots)
10.5	99.2	GSM133126	S0_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.5	99.2	GSM133718	Urwin_A-2-Urwin-Inf_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
10.5	99.2	GSM157337	Coates_1-9_Col-0_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.4	99.2	GSM131067	Edwards_1-2_30hr_Rep1_ATH1	GSE5612	Circadian expression of genes: modelling the Arabidopsis circadian clock
9.9	99.1	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.9	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243239	-	-	-
9.8	99.1	GSM207296	Seedling_ConstantWhiteLight_64hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.7	99.1	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.7	99.1	GSM290759	root - 01% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.6	99.1	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
9.5	99.1	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.5	99.1	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.4	99.1	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.3	99.1	GSM207295	Seedling_ConstantWhiteLight_60hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.3	99.1	GSM131306	AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
9.3	99.1	GSM207291	Seedling_ConstantWhiteLight_44hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
9.2	99.1	ArrayExpress	E-MEXP-443-raw-cel-669122927	-	-	-
9.2	99.1	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.2	99.1	GSM231200	chl1 at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.1	99.1	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
9.1	99.1	GSM131305	AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
9.1	99.1	GSM133280	RIKEN-GODA2B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
9.0	99.1	GSM157334	Coates_1-6_ara1OX_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.0	99.1	GSM131645	ATGE_2_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.8	99.0	GSM131643	ATGE_2_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.7	99.0	GSM207290	Seedling_ConstantWhiteLight_40hr	GSE8365	Identification of circadian-regulated genes of Arabidopsis thaliana.
8.7	99.0	GSM131644	ATGE_2_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)

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