Specifically-expressed experiments

Gene ID	At5g35940
Gene name	jacalin lectin family protein
Functional description	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
306.1	100.0	GSM133969	Birnbaum_1-20_LRC-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
208.8	100.0	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
192.7	100.0	GSM252683	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep5	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
155.9	99.9	GSM252688	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
125.5	99.9	GSM252682	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
115.1	99.9	GSM252689	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
109.6	99.9	GSM252686	Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
107.5	99.9	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
96.1	99.9	GSM252672	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
94.2	99.9	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
91.6	99.9	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
89.3	99.9	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
89.2	99.9	GSM252678	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
88.7	99.9	GSM252671	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
88.0	99.9	GSM252664	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
86.8	99.9	GSM252685	Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
85.4	99.9	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
80.8	99.9	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
80.2	99.9	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
80.0	99.9	GSM252687	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
74.0	99.9	GSM252669	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
71.7	99.9	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
71.5	99.9	GSM252666	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
64.1	99.8	GSM265415	Arabidopsis, root cells, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
59.5	99.8	GSM252677	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
59.4	99.8	GSM252684	Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
59.4	99.8	GSM252673	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
57.0	99.8	GSM252679	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
53.6	99.8	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
52.3	99.8	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
49.3	99.8	GSM252663	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
48.7	99.8	GSM133974	Birnbaum_1-4_StageI-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
47.8	99.8	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
47.5	99.8	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
43.2	99.8	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
40.8	99.8	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
40.1	99.8	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
39.9	99.8	GSM133975	Birnbaum_1-5_StageI-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
39.7	99.8	GSM252670	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
39.4	99.8	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
38.5	99.8	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
38.0	99.8	GSM252665	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
37.5	99.7	GSM252676	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
36.9	99.7	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
33.5	99.7	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
32.3	99.7	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
31.3	99.7	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
30.8	99.7	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
27.7	99.7	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
27.7	99.7	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
27.5	99.7	GSM184831	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
26.7	99.7	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
26.3	99.7	GSM252681	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
25.6	99.7	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
25.2	99.6	GSM265427	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
23.9	99.6	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
21.0	99.6	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
20.3	99.6	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
20.1	99.6	GSM252674	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
19.8	99.6	GSM184832	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
19.4	99.6	GSM133991	Birnbaum_1-24_gl2-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
19.1	99.6	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
18.6	99.5	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
18.5	99.5	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
17.0	99.5	GSM133977	Birnbaum_1-7_StageI-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
16.5	99.5	GSM290755	root - 01% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
16.0	99.5	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
15.4	99.5	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
14.7	99.4	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
14.5	99.4	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.4	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
14.2	99.4	GSM252668	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
14.1	99.4	GSM252680	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
14.0	99.4	GSM265419	Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.8	99.4	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
13.5	99.4	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
13.2	99.4	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
12.5	99.3	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.2	99.3	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.3	99.3	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.8	99.2	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
10.3	99.2	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
10.1	99.2	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
9.7	99.1	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.0	99.1	GSM265426	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.0	99.1	GSM133807	Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
8.9	99.0	GSM290828	root - 04% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.9	99.0	GSM252675	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
8.9	99.0	GSM271059	Arabidopsis plant (Col-0), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
8.9	99.0	GSM133768	Lindsey_1-20_torpedo-basal_Rep5_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.7	99.0	GSM226543	Slice1JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function

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