Specifically-expressed experiments

Gene ID	At5g28610
Gene name	-
Functional description	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
452.9	100.0	GSM218586	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
206.8	100.0	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
152.1	99.9	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
136.0	99.9	GSM218585	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
116.1	99.9	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
109.6	99.9	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
96.0	99.9	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
92.4	99.9	GSM184498	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
89.7	99.9	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
89.5	99.9	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
86.6	99.9	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
74.6	99.9	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
74.4	99.9	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
74.1	99.9	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
73.9	99.9	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
73.6	99.9	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
73.2	99.9	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
71.8	99.9	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
69.9	99.9	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
69.6	99.9	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
67.4	99.8	GSM184502	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
67.2	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
66.2	99.8	GSM218587	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
64.0	99.8	GSM184492	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
58.6	99.8	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
56.9	99.8	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
56.8	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
56.1	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.7	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
53.1	99.8	GSM184508	Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
53.0	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
49.4	99.8	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
46.3	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
45.7	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.3	99.8	GSM184501	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
42.8	99.8	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
42.6	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
41.9	99.8	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.5	99.8	GSM184922	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
40.4	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
40.3	99.8	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.1	99.8	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.8	99.8	GSM184491	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.5	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
36.2	99.7	GSM48127	Col_CSC3	GSE2538	Chitin Oligomer Experiment
35.7	99.7	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
34.9	99.7	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
33.3	99.7	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
32.6	99.7	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
30.1	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.7	99.7	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
26.9	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
23.9	99.6	GSM142649	MC002_ATH1_A9.3-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
22.9	99.6	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
22.4	99.6	GSM231197	wild-type at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
21.4	99.6	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.3	99.6	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
20.4	99.6	GSM48126	Col_CSC2	GSE2538	Chitin Oligomer Experiment
20.3	99.6	GSM142647	MC002_ATH1_A9.1-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
20.1	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
20.1	99.6	GSM184557	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.8	99.6	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.8	99.6	GSM48125	Col_CSC1	GSE2538	Chitin Oligomer Experiment
19.7	99.6	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
19.4	99.6	GSM142645	MC002_ATH1_A8.2-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.4	99.6	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
17.3	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
17.1	99.5	GSM260883	Yap_A2-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
17.0	99.5	GSM142648	MC002_ATH1_A9.2-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
16.0	99.5	GSM131558	ATGE_9_A	GSE5631	AtGenExpress: Developmental series (roots)
15.5	99.5	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.3	99.4	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
15.2	99.4	GSM48123	Col_8mer2	GSE2538	Chitin Oligomer Experiment
15.0	99.4	GSM48124	Col_8mer3	GSE2538	Chitin Oligomer Experiment
14.8	99.4	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
14.7	99.4	GSM142653	MC002_ATH1_A11.1-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
14.1	99.4	ArrayExpress	E-NASC-76-raw-cel-1359879132	-	-	-
13.4	99.4	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
13.3	99.4	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.9	99.3	GSM184495	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.6	99.3	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
12.5	99.3	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.3	99.3	GSM142654	MC002_ATH1_A11.2-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
12.0	99.3	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
11.4	99.3	GSM142646	MC002_ATH1_A8.3-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.3	99.3	GSM260880	Yap_A1-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
11.2	99.2	GSM48122	Col_8mer1	GSE2538	Chitin Oligomer Experiment
11.2	99.2	GSM218591	Whole roots 3.5hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.1	99.2	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.8	99.2	GSM131559	ATGE_9_B	GSE5631	AtGenExpress: Developmental series (roots)
10.8	99.2	GSM184509	Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.6	99.2	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.5	99.2	GSM184503	Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.4	99.2	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
9.7	99.1	GSM142644	MC002_ATH1_A8.1-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.5	99.1	GSM131313	AtGen_6-3221_Saltstress-Roots-1.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.4	99.1	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
9.3	99.1	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
9.2	99.1	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.0	99.1	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
8.9	99.0	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
8.9	99.0	GSM184488	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM184493	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.8	99.0	GSM260882	Yap_A1-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
8.8	99.0	GSM231203	chl1 at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
8.7	99.0	GSM206276	Wild type, chitooctaose treatment, biological rep3	GSE8319	A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis

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