Specifically-expressed experiments

Gene ID At5g24140
Gene name SQP2
Functional description Encodes a protein with similarity to squalene monoxygenases.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
224.3100.0ArrayExpressE-MEXP-722-raw-cel-1062243516---
141.599.9ArrayExpressE-MEXP-722-raw-cel-1062243559---
135.099.9ArrayExpressE-MEXP-722-raw-cel-1062243470---
134.199.9ArrayExpressE-MEXP-722-raw-cel-1062242948---
116.599.9ArrayExpressE-MEXP-722-raw-cel-1062243108---
111.699.9ArrayExpressE-MEXP-722-raw-cel-1062242857---
102.199.9GSM133803Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
96.299.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
89.899.9ArrayExpressE-MEXP-722-raw-cel-1062243429---
85.299.9ArrayExpressE-MEXP-722-raw-cel-1062243314---
72.699.9GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
69.199.9GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
67.499.8GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
67.399.8GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
66.999.8ArrayExpressE-MEXP-722-raw-cel-1062243183---
66.499.8GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
56.999.8ArrayExpressE-MEXP-722-raw-cel-1062243239---
55.699.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
55.299.8GSM133807Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
51.599.8GSM179978Arabidopsis ein2 mutant roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
50.399.8GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
48.399.8GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
48.099.8ArrayExpressE-MEXP-1304-raw-cel-1530618068---
47.899.8ArrayExpressE-MEXP-722-raw-cel-1062243390---
45.499.8GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
45.399.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
44.199.8GSM133802Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
42.399.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
42.199.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
40.299.8GSM179977Arabidopsis ein2 mutant roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
37.799.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
35.899.7ArrayExpressE-MEXP-722-raw-cel-1062243048---
35.099.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.499.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.699.7GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
31.099.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.399.7GSM179971Arabidopsis roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
27.699.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
27.599.7GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
27.199.7GSM179972Arabidopsis roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
26.399.7GSM142695MH001_ATH1_A9-grevi-CT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
25.799.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
25.699.7ArrayExpressE-MEXP-1304-raw-cel-1530618003---
25.699.7GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
24.899.6GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
24.599.6GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
24.199.6GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
23.899.6ArrayExpressE-MEXP-1304-raw-cel-1530617935---
23.099.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
22.599.6GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
22.099.6GSM142696MH001_ATH1_A10-grevi-AT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
21.999.6GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
21.799.6GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
21.699.6GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.999.6GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
20.899.6ArrayExpressE-MEXP-1304-raw-cel-1530618104---
20.799.6GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.799.6GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
20.699.6GSM39193RRE1_C3GSE2169rre1 and rre2 mutantsLink to GEO
19.499.6ArrayExpressE-MEXP-1304-raw-cel-1530617971---
19.499.6GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
18.799.5GSM39209RRE2_C3GSE2169rre1 and rre2 mutantsLink to GEO
18.199.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.099.5GSM39210RRE2_C4GSE2169rre1 and rre2 mutantsLink to GEO
17.899.5GSM142697MH001_ATH1_A11-grevi-AT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
17.799.5GSM142698MH001_ATH1_A12-grevi-AT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
17.399.5GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
17.099.5GSM142672SF001_ATH1_A2-Fille-WT-+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
16.999.5GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
16.899.5GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
16.899.5GSM179973Arabidopsis roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
16.499.5GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
16.199.5ArrayExpressE-MEXP-1304-raw-cel-1530618171---
15.799.5ArrayExpressE-MEXP-1304-raw-cel-1530617900---
15.799.5GSM39194RRE1_C4GSE2169rre1 and rre2 mutantsLink to GEO
15.699.5GSM142671SF001_ATH1_A1-Fille-WT-nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
15.699.5GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
15.599.5GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
15.599.5GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
15.599.5GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
15.499.5GSM142694MH001_ATH1_A8-grevi-CT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
15.099.4GSM39201Col_C3GSE2169rre1 and rre2 mutantsLink to GEO
14.799.4GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
14.799.4GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
14.199.4GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
14.099.4GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
13.999.4GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.599.4GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
13.499.4GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.499.4GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
13.199.4GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
13.099.4GSM142693MH001_ATH1_A7-grevi-CT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
13.099.4GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
12.599.3GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.499.3GSM142692MH001_ATH1_A6-grevi-AC3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
12.299.3GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.199.3GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
11.999.3GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
11.699.3GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
11.699.3GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
11.699.3GSM39199Col_C1GSE2169rre1 and rre2 mutantsLink to GEO
11.599.3GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
11.299.2GSM39202Col_C4GSE2169rre1 and rre2 mutantsLink to GEO
11.299.2GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
11.099.2GSM184903Arabidopsis, root cells, stele, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
11.099.2ArrayExpressE-MEXP-1784-raw-cel-1661573074---
10.999.2GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.999.2GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.599.2GSM142691MH001_ATH1_A5-grevi-AC2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
10.399.2GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.199.2GSM133125S0_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.199.2GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
10.099.2GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
9.799.1GSM157337Coates_1-9_Col-0_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.599.1GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
9.499.1GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
9.499.1GSM39191RRE1_C1GSE2169rre1 and rre2 mutantsLink to GEO
9.399.1GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.399.1GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.199.1GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
9.199.1GSM142669SF002_ATH1_A7-Fille-ANGR4-12nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
9.199.1GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.099.1GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
9.099.1GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
9.099.1ArrayExpressE-MEXP-715-raw-cel-1121836247---
8.999.0GSM265461Arabidopsis, whole roots, standard conditions, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
8.899.0GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO



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