Specifically-expressed experiments

Gene ID	At5g23840
Gene name	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
Functional description	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
250.1	100.0	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
242.7	100.0	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
224.5	100.0	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
217.6	100.0	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
120.2	99.9	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
105.8	99.9	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
104.8	99.9	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
103.0	99.9	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
95.8	99.9	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
89.9	99.9	GSM231200	chl1 at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
89.4	99.9	GSM231197	wild-type at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
85.0	99.9	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
78.3	99.9	GSM231203	chl1 at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
66.4	99.8	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
58.4	99.8	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
57.9	99.8	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
54.0	99.8	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
51.5	99.8	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
48.8	99.8	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
47.7	99.8	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
46.9	99.8	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
41.3	99.8	ArrayExpress	E-MEXP-1468-raw-cel-1591138985	-	-	-
40.7	99.8	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
39.0	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
36.1	99.7	GSM133806	Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
35.3	99.7	ArrayExpress	E-MEXP-1468-raw-cel-1591139018	-	-	-
33.4	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
28.1	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
28.1	99.7	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
27.5	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
27.0	99.7	GSM133807	Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
26.5	99.7	GSM179967	Arabidopsis aux1 mutant roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
25.8	99.7	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
25.4	99.6	GSM290828	root - 04% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
24.3	99.6	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
24.3	99.6	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
24.2	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243239	-	-	-
22.8	99.6	GSM9585	arf19-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
22.7	99.6	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
22.6	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
22.5	99.6	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
22.5	99.6	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
22.4	99.6	GSM179974	Arabidopsis roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
22.2	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
21.9	99.6	GSM265462	Arabidopsis, whole roots, standard conditions, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
21.6	99.6	GSM179973	Arabidopsis roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
21.5	99.6	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
21.1	99.6	GSM179961	Arabidopsis roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
21.1	99.6	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
20.6	99.6	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
20.2	99.6	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
20.1	99.6	GSM179960	Arabidopsis roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
19.6	99.6	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
19.6	99.6	GSM179970	Arabidopsis aux1 mutant roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
19.0	99.5	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
18.7	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
18.3	99.5	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
18.2	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062243390	-	-	-
18.0	99.5	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
17.8	99.5	GSM133800	Werner_1-1_wildtype-2hr-control(c2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
17.8	99.5	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
17.5	99.5	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
17.4	99.5	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
16.9	99.5	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.8	99.5	GSM9588	arf19-1_+IAA_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
16.8	99.5	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
16.4	99.5	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
16.3	99.5	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.2	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
16.1	99.5	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.0	99.5	GSM265466	Arabidopsis, whole roots, -Fe, 6 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
15.9	99.5	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
15.5	99.5	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
15.3	99.4	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
15.2	99.4	GSM265464	Arabidopsis, whole roots, -Fe, 3 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
15.1	99.4	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
14.8	99.4	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.7	99.4	GSM25861	Negative Control - 4	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
14.7	99.4	GSM9603	iaa17-6_control_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.6	99.4	GSM25863	IAA Treated - 2	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
14.4	99.4	GSM291124	root - 21% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.4	99.4	GSM133801	Werner_1-2_wildtype-24hr-control(c4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
13.8	99.4	GSM25860	Negative Control - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
13.5	99.4	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
13.5	99.4	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
13.2	99.4	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
13.0	99.4	GSM265465	Arabidopsis, whole roots, -Fe, 6 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
13.0	99.4	GSM9587	arf19-1_+IAA_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
12.7	99.3	GSM9584	arf19-1_control_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
12.6	99.3	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
12.5	99.3	GSM142675	SF002_ATH1_A6-Fille-WT+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
12.5	99.3	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
12.5	99.3	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.3	99.3	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.3	99.3	GSM9590	nph4-1arf19-1_control_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
12.1	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243048	-	-	-
11.7	99.3	GSM39199	Col_C1	GSE2169	rre1 and rre2 mutants
11.6	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922553	-	-	-
11.3	99.3	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.3	99.3	GSM9594	nph4-1arf19-1_+IAA_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
11.1	99.2	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
11.0	99.2	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.9	99.2	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
10.7	99.2	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.7	99.2	GSM9591	nph4-1arf19-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
10.6	99.2	GSM9607	iaa17-6_+IAA_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
10.6	99.2	GSM290825	root - 04% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.5	99.2	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
10.4	99.2	ArrayExpress	E-ATMX-31-raw-cel-1516948001	-	-	-
10.4	99.2	GSM9579	nph4-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
10.3	99.2	GSM290759	root - 01% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3	99.2	GSM265461	Arabidopsis, whole roots, standard conditions, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.2	99.2	GSM142671	SF001_ATH1_A1-Fille-WT-nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
10.2	99.2	GSM290755	root - 01% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.2	99.2	GSM25864	IAA Treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
10.1	99.2	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
9.9	99.1	GSM265468	Arabidopsis, whole roots, -Fe, 12 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.9	99.1	GSM131567	ATGE_95_A	GSE5631	AtGenExpress: Developmental series (roots)
9.8	99.1	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
9.8	99.1	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
9.8	99.1	GSM9615	i5i6i19_control_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.8	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
9.7	99.1	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.6	99.1	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.4	99.1	GSM9593	nph4-1arf19-1_+IAA_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
8.8	99.0	GSM9577	nph4-1_control_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
8.8	99.0	GSM25858	Negative control - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
8.8	99.0	GSM291101	root - 21% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.7	99.0	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
8.7	99.0	GSM25862	IAA treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
8.6	99.0	GSM142821	PJ002_ATH1_A2-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes

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