Specifically-expressed experiments

Gene ID At5g23020
Gene name IMS2 (2-ISOPROPYLMALATE SYNTHASE 2)
Functional description methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.099.7ArrayExpressE-MEXP-828-raw-cel-1156922296---
31.999.7GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
30.999.7GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
29.799.7ArrayExpressE-MEXP-828-raw-cel-1156922809---
29.399.7ArrayExpressE-MEXP-828-raw-cel-1156922509---
28.699.7GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
28.399.7GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
26.199.7GSM27365lec1-1 RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
25.999.7ArrayExpressE-MEXP-828-raw-cel-1156922905---
22.199.6ArrayExpressE-MEXP-828-raw-cel-1156922455---
21.999.6ArrayExpressE-MEXP-828-raw-cel-1156922318---
21.599.6ArrayExpressE-MEXP-635-raw-cel-912819824---
21.099.6GSM131438AtGen_6-8622_Woundingstress-Roots-24.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
20.999.6ArrayExpressE-MEXP-828-raw-cel-1156922386---
20.599.6GSM157314Hammond_3-4_Control-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
19.999.6GSM133140S1500_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
19.599.6ArrayExpressE-MEXP-828-raw-cel-1156922368---
19.299.6ArrayExpressE-MEXP-828-raw-cel-1156922923---
19.199.6GSM131434AtGen_6-8525_Woundingstress-Roots-12.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
18.899.5GSM131433AtGen_6-8524_Woundingstress-Roots-12.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
18.599.5GSM133135S1500_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
18.499.5ArrayExpressE-MEXP-828-raw-cel-1156922572---
18.399.5ArrayExpressE-MEXP-828-raw-cel-1156922416---
18.299.5GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
18.199.5ArrayExpressE-MEXP-635-raw-cel-912819840---
17.799.5GSM133142S1500_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
17.499.5GSM133141S1500_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
17.399.5GSM133136S1500_24H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
16.499.5GSM157310Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
16.399.5ArrayExpressE-MEXP-828-raw-cel-1156922342---
15.999.5ArrayExpressE-MEXP-791-raw-cel-1122937596---
15.999.5GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
15.599.5GSM128695Heinekamp_1-4_cs-root_Rep1_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
15.599.5GSM9615i5i6i19_control_2GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutantsLink to GEO
14.899.4GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
14.899.4ArrayExpressE-MEXP-637-raw-cel-913038938---
14.499.4GSM231201chl1 at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
14.199.4GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.199.4ArrayExpressE-MEXP-828-raw-cel-1156922829---
14.099.4GSM231195wild-type at T0, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
14.099.4GSM231204chl1 at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
13.999.4GSM133132S1500_0H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
13.899.4ArrayExpressE-MEXP-791-raw-cel-1122937605---
13.699.4ArrayExpressE-MEXP-828-raw-cel-1156922553---
13.599.4GSM9585arf19-1_control_3GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
13.499.4ArrayExpressE-ATMX-5-raw-cel-1303134335---
13.299.4GSM131418AtGen_6-8126_Woundingstress-Roots-0.5h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
13.199.4GSM133128S0_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.999.3GSM131414AtGen_6-8724_Woundingstress-Roots-0.25h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
12.699.3GSM131413AtGen_6-8723_Woundingstress-Roots-0.25h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
12.599.3ArrayExpressE-MEXP-791-raw-cel-1122937479---
12.299.3ArrayExpressE-MEXP-637-raw-cel-913038965---
12.099.3GSM25869A Treated - 4GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
12.099.3GSM131333AtGen_6-4721_Droughtstress-Roots-0.25h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.099.3ArrayExpressE-MEXP-828-raw-cel-1156922846---
11.999.3GSM131422AtGen_6-8225_Woundingstress-Roots-1.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
11.899.3GSM271071Arabidopsis plant (tga2-5-6), 4h_control_rep3GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
11.899.3GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
11.799.3GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
11.799.3GSM131449AtGen_6-9221_Heatstress-Roots-1.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
11.799.3GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM131261AtGen_6-1121_Cold(4°C)-Roots-0.5h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.699.3GSM133138S1500_2H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.699.3ArrayExpressE-MEXP-828-raw-cel-1156922467---
11.599.3GSM131225AtGen_6-0021_Control-Roots-0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
11.599.3GSM25861Negative Control - 4GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
11.499.3GSM131354AtGen_6-4522_Droughtstress-Roots-12.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
11.399.3GSM9616i5i6i19_control_3GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutantsLink to GEO
11.399.3GSM9578nph4-1_control_2GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
11.299.2GSM133134S1500_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.299.2GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
11.099.2GSM9602iaa17-6_control_2GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutantsLink to GEO
11.099.2GSM131429AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
11.099.2GSM133126S0_2H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.999.2GSM157309Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
10.699.2GSM131337AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
10.699.2GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
10.699.2GSM131446AtGen_6-9122_Heatstress-Roots-0.5h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.699.2ArrayExpressE-MEXP-828-raw-cel-1156922533---
10.599.2GSM271053Arabidopsis plant (Col-0), 4h_control_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
10.599.2GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
10.499.2GSM131555ATGE_3_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.499.2ArrayExpressE-MEXP-828-raw-cel-1156922944---
10.399.2GSM271066Arabidopsis plant (tga2-5-6), 4h_control_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
10.399.2GSM133130S0_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.399.2GSM157326Hammond_3-10_Control-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
10.299.2GSM131365AtGen_6-5221_Genotoxicstress-Roots-1.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
10.299.2ArrayExpressE-MEXP-791-raw-cel-1122937497---
10.299.2GSM133131S1500_0H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.199.2GSM131450AtGen_6-9222_Heatstress-Roots-1.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.199.2GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.199.2GSM9582nph4-1_+IAA_3GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
10.199.2ArrayExpressE-MEXP-1262-raw-cel-1502675762---
10.199.2GSM131358AtGen_6-4622_Droughtstress-Roots-24.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
10.199.2GSM131226AtGen_6-0022_Control-Roots-0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.099.2GSM9584arf19-1_control_2GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
10.099.2GSM131238AtGen_6-0222_Control-Roots-1.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.999.1GSM131556ATGE_3_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.899.1GSM9595Col_control_I_1GSE629Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutantsLink to GEO
9.899.1ArrayExpressE-MEXP-791-raw-cel-1122937614---
9.899.1GSM9572Col_control_2GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
9.799.1ArrayExpressE-MEXP-791-raw-cel-1122937578---
9.699.1GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.699.1GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.599.1GSM9577nph4-1_control_1GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
9.599.1GSM131361AtGen_6-5121_Genotoxicstress-Roots-0.5h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.599.1GSM133262RIKEN-GODA2B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.599.1GSM231198wild-type at T0.5, biological rep3GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5hLink to GEO
9.499.1GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
9.399.1GSM271065Arabidopsis plant (tga2-5-6), 4h_control_rep1GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
9.399.1GSM131401AtGen_6-7421_UV-Bstress-Roots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.399.1ArrayExpressE-MEXP-1799-raw-cel-1665601126---
9.299.1GSM133133S1500_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.299.1GSM142733CH001_ATH1_A012-Hampt-c1cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.299.1GSM142721CH001_ATH1_A001-Hampt-wsaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.299.1GSM260880Yap_A1-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
9.199.1GSM131353AtGen_6-4521_Droughtstress-Roots-12.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
9.199.1GSM131286AtGen_6-2122_Osmoticstress-Roots-0.5h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.199.1GSM131417AtGen_6-8124_Woundingstress-Roots-0.5h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
9.099.1GSM25868A treated - 3GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
8.999.0GSM131406AtGen_6-7522_UV-Bstress-Roots-12.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
8.999.0GSM131366AtGen_6-5222_Genotoxicstress-Roots-1.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
8.999.0ArrayExpressE-TABM-62-raw-cel-720980445---
8.999.0GSM9593nph4-1arf19-1_+IAA_2GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
8.999.0GSM131430AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
8.999.0GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
8.899.0ArrayExpressE-MEXP-791-raw-cel-1122937470---
8.899.0GSM131557ATGE_3_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.899.0GSM9590nph4-1arf19-1_control_2GSE627Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutantsLink to GEO
8.899.0GSM131421AtGen_6-8224_Woundingstress-Roots-1.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
8.799.0GSM131442AtGen_6-9722_Heatstress-Roots-0.25h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
8.799.0ArrayExpressE-MEXP-828-raw-cel-1156922485---
8.799.0GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
8.799.0GSM128693Heinekamp_1-2_control-root_Rep1_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
8.699.0GSM128699Heinekamp_1-8_cs-root_Rep2_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
8.699.0GSM133264RIKEN-GODA3B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO



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