Specifically-expressed experiments

Gene ID	At5g22920
Gene name	zinc finger (C3HC4-type RING finger) family protein
Functional description	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.7	99.5	GSM226273	YHB_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
15.5	99.5	ArrayExpress	E-MEXP-513-raw-cel-829814446	-	-	-
14.2	99.4	GSM253159	4h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
13.0	99.4	ArrayExpress	E-TABM-126-raw-cel-1242543449	-	-	-
13.0	99.4	GSM128788	Somerville_1-11_stem-GH8_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
12.9	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519902871	-	-	-
12.9	99.3	GSM292081	pif1-2, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
12.7	99.3	GSM226275	YHB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
12.6	99.3	GSM77178	04h low CO2 + light replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
12.3	99.3	GSM253158	4h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
12.2	99.3	GSM311269	ged1 seedlings, biological rep1	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
12.1	99.3	GSM311271	ged1 seedlings, biological rep3	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
12.1	99.3	GSM253162	8h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
12.0	99.3	GSM226279	WT(Ler)_Rc50_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
11.9	99.3	GSM128786	Somerville_1-9_stem-GC8_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
11.7	99.3	GSM10477	lec1-1 24-Hr Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
11.7	99.3	GSM311270	ged1 seedlings, biological rep2	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
11.6	99.3	GSM226276	WT(Ler)_Rc15_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
11.6	99.3	ArrayExpress	E-MEXP-513-raw-cel-829814430	-	-	-
11.3	99.3	GSM253160	6h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
11.3	99.3	ArrayExpress	E-TABM-63-raw-cel-681137052	-	-	-
11.2	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519902498	-	-	-
11.1	99.2	ArrayExpress	E-TABM-63-raw-cel-681137015	-	-	-
10.9	99.2	GSM77187	16h pgm (Col-0) mutant replicate A	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
10.8	99.2	GSM226274	YHB_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.6	99.2	GSM226281	YHB_Rc50_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.4	99.2	ArrayExpress	E-MEXP-265-raw-cel-414618491	-	-	-
10.3	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519902780	-	-	-
10.3	99.2	GSM109123	vte2-1(Col-0) 3 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
10.1	99.2	GSM109116	wild-type(Col-0) 3 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
10.0	99.2	GSM77180	04h low CO2 + dark replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
10.0	99.2	ArrayExpress	E-MEXP-265-raw-cel-414618291	-	-	-
10.0	99.2	GSM226280	YHB_Rc50_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.8	99.1	GSM67112	Arabidopsis_Seedling04	GSE3056	Arabidopsis Pollination Study
9.7	99.1	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
9.7	99.1	ArrayExpress	Rente_1-4_KKO-Control_Rep1_ATH1	-	-	-
9.7	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982467	-	-	-
9.6	99.1	GSM253163	24h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
9.6	99.1	GSM253198	RGA-GR-DEX-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
9.5	99.1	GSM226278	WT(Ler)_Rc50_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.5	99.1	ArrayExpress	E-MEXP-513-raw-cel-829814478	-	-	-
9.4	99.1	GSM133400	Knight_2-3_sfr6-lt_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
9.3	99.1	ArrayExpress	E-TABM-126-raw-cel-1242543113	-	-	-
9.2	99.1	GSM47019	Ler 9	GSE2473	Small RNA biogenesis mutants
9.2	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519903415	-	-	-
9.2	99.1	ArrayExpress	E-TABM-126-raw-cel-1242543369	-	-	-
9.1	99.1	GSM253161	8h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
9.0	99.1	ArrayExpress	E-TABM-126-raw-cel-1242543753	-	-	-
8.9	99.0	GSM250972	sid2 mutant with H2O treatment, biological rep1	GSE9955	MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense response
8.8	99.0	GSM253165	48h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
8.7	99.0	GSM304028	Wildtype no treatement rep 1	GSE12029	NFYA5, a CCAAT binding transcription factor important for drought resistance in Arabidopsis
8.7	99.0	ArrayExpress	Rente_1-3_WS2-Control_Rep1_ATH1	-	-	-

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