Specifically-expressed experiments

Gene ID	At5g22530
Gene name	unknown protein
Functional description	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
221.5	100.0	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
158.4	99.9	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
127.5	99.9	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
124.7	99.9	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
102.7	99.9	GSM218586	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
91.7	99.9	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
89.8	99.9	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
87.8	99.9	GSM131395	AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
86.4	99.9	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
83.8	99.9	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
82.0	99.9	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
79.8	99.9	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
70.6	99.9	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
68.5	99.9	GSM131396	AtGen_6-7312_UV-Bstress-Shoots-3.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
66.7	99.8	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
61.0	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
60.1	99.8	GSM134458	St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
58.2	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
57.1	99.8	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
52.6	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
51.5	99.8	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
50.8	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
50.0	99.8	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
48.5	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
46.4	99.8	GSM269496	mkk1/mkk2, no-treatment, rep-C	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
45.7	99.8	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
45.6	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
45.4	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
45.0	99.8	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
43.4	99.8	GSM184502	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
43.0	99.8	ArrayExpress	E-MEXP-509-raw-cel-829148456	-	-	-
42.9	99.8	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
42.2	99.8	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
41.4	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.0	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.8	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.5	99.8	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.6	99.7	GSM269495	mkk1/mkk2, no-treatment, rep-B	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
36.9	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.8	99.7	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
35.9	99.7	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
35.8	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
35.3	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148420	-	-	-
32.5	99.7	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
31.6	99.7	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
31.6	99.7	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
31.1	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.8	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148348	-	-	-
30.3	99.7	GSM131342	AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
30.3	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148129	-	-	-
30.3	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.0	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.7	99.7	GSM218587	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.5	99.7	GSM131400	AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
29.3	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.5	99.7	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
27.8	99.7	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
26.8	99.7	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
26.7	99.7	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
26.7	99.7	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
23.5	99.6	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
22.9	99.6	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
21.9	99.6	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
20.9	99.6	GSM131313	AtGen_6-3221_Saltstress-Roots-1.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
20.7	99.6	GSM184498	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.4	99.6	GSM184555	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.3	99.6	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
20.2	99.6	GSM134405	St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
19.2	99.6	GSM131314	AtGen_6-3222_Saltstress-Roots-1.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
18.3	99.5	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
17.9	99.5	GSM184527	Stele root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.7	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148561	-	-	-
17.3	99.5	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
17.2	99.5	GSM152140	siz1-3 control 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
16.1	99.5	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
15.7	99.5	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
15.7	99.5	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.6	99.5	GSM269498	mkk1/mkk2, 24h after BTH, rep-B	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
15.3	99.4	ArrayExpress	E-MEXP-174-raw-cel-357966634	-	-	-
15.1	99.4	GSM131399	AtGen_6-7411_UV-Bstress-Shoots-6.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
15.0	99.4	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.9	99.4	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.8	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
14.7	99.4	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.4	99.4	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.2	99.4	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
14.1	99.4	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.9	99.4	GSM152144	siz1-3 control 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
13.7	99.4	ArrayExpress	E-NASC-76-raw-cel-1359879132	-	-	-
13.5	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
13.4	99.4	GSM322548	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
13.3	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148597	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-174-raw-cel-357966668	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-174-raw-cel-357966600	-	-	-
13.1	99.4	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
12.7	99.3	GSM131341	AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
12.7	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
12.4	99.3	GSM134403	St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
12.4	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148201	-	-	-
12.0	99.3	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
11.9	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148385	-	-	-
11.7	99.3	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
11.4	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148492	-	-	-
11.3	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148525	-	-	-
11.0	99.2	GSM152142	siz1-3 control 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
10.8	99.2	GSM131390	AtGen_6-7122_UV-Bstress-Roots-0.5h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
10.6	99.2	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.5	99.2	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.3	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
10.3	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
10.1	99.2	GSM184503	Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.9	99.1	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.7	99.1	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.6	99.1	GSM269499	mkk1/mkk2, 24h after BTH, rep-C	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
9.6	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
9.4	99.1	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
9.3	99.1	GSM218589	Protoplasted root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	ArrayExpress	E-TABM-60-raw-cel-680980278	-	-	-
8.8	99.0	ArrayExpress	E-NASC-76-raw-cel-1359879028	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-509-raw-cel-829148877	-	-	-

Back to the CoP portal site

Back to the KAGIANA project homepage