Specifically-expressed experiments

Gene ID	At5g21170
Gene name	5'-AMP-activated protein kinase beta-2 subunit, putative
Functional description	F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
42.8	99.8	GSM253166	48h into an extended nightC	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
40.9	99.8	GSM253164	24h into an extended nightC	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
31.7	99.7	GSM253160	6h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
30.7	99.7	GSM253198	RGA-GR-DEX-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
30.4	99.7	GSM253161	8h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
30.1	99.7	GSM253163	24h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
29.3	99.7	GSM205185	protoplast_KIN10_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
28.8	99.7	ArrayExpress	E-MEXP-1299-raw-cel-1519902871	-	-	-
28.4	99.7	GSM253196	RGA-GR-DEX-REP2	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
27.6	99.7	GSM253165	48h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
27.3	99.7	GSM253158	4h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
24.4	99.6	GSM40553	Total RNA - hypoxia stress	GSE2218	Changes in transcript abundance and association with large polysomes in response to hypoxia stress
23.1	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507553	-	-	-
22.5	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507513	-	-	-
21.6	99.6	GSM40555	Polysomal mRNA - Hypoxia stress	GSE2218	Changes in transcript abundance and association with large polysomes in response to hypoxia stress
21.1	99.6	ArrayExpress	E-MEXP-1299-raw-cel-1519902780	-	-	-
19.2	99.6	GSM77188	20h pgm (Col-0) mutant replicate A	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
19.1	99.6	ArrayExpress	E-MEXP-1112-raw-cel-1590665689	-	-	-
18.7	99.5	GSM67112	Arabidopsis_Seedling04	GSE3056	Arabidopsis Pollination Study
18.6	99.5	GSM253162	8h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
18.5	99.5	GSM77182	00h pgm (Col-0) mutant replicate B	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
17.7	99.5	ArrayExpress	E-MEXP-1094-raw-cel-1379507433	-	-	-
17.0	99.5	GSM158703	WT-ESTRADIOL-REP1	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
16.9	99.5	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
16.9	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138952	-	-	-
16.8	99.5	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
16.7	99.5	ArrayExpress	E-MEXP-1299-raw-cel-1519902498	-	-	-
16.7	99.5	GSM282699	Col_BRZ_rep3	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
16.6	99.5	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
16.3	99.5	GSM133400	Knight_2-3_sfr6-lt_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
16.2	99.5	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
16.2	99.5	GSM77181	00h pgm (Col-0) mutant replicate A	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
16.2	99.5	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.2	99.5	GSM282697	Col_BRZ_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
16.0	99.5	ArrayExpress	E-MEXP-1094-raw-cel-1379507473	-	-	-
15.5	99.5	GSM253159	4h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
15.5	99.5	ArrayExpress	Rente_1-4_KKO-Control_Rep1_ATH1	-	-	-
15.5	99.5	GSM77180	04h low CO2 + dark replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
15.4	99.5	GSM282703	arf2_brz_2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
15.0	99.4	ArrayExpress	E-MEXP-1299-raw-cel-1519903415	-	-	-
14.7	99.4	ArrayExpress	E-MEXP-513-raw-cel-829814446	-	-	-
14.2	99.4	GSM282694	arf2_mock_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
14.0	99.4	GSM282698	Col_BRZ_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
14.0	99.4	GSM142779	AM002_ATH1_A4-MCCOR-GDA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
13.8	99.4	GSM158702	HY213-ESTRADIOL-REP1	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
13.6	99.4	GSM142778	AM002_ATH1_A3-MCCOR-GFA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
13.6	99.4	GSM282695	arf2_mock_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
13.5	99.4	ArrayExpress	E-MEXP-1299-raw-cel-1519903848	-	-	-
13.4	99.4	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.2	99.4	GSM282693	arf2_brz_1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
13.2	99.4	ArrayExpress	Rente_1-3_WS2-Control_Rep1_ATH1	-	-	-
13.2	99.4	GSM282696	arf2_mock_rep3	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
13.0	99.4	ArrayExpress	E-MEXP-1112-raw-cel-1590665741	-	-	-
13.0	99.4	GSM128651	Underwood_1-4_Cor-hrpS-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.9	99.3	GSM77178	04h low CO2 + light replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
12.8	99.3	ArrayExpress	E-MEXP-148-raw-cel-350529355	-	-	-
12.8	99.3	ArrayExpress	E-MEXP-1112-raw-cel-1590665273	-	-	-
12.8	99.3	ArrayExpress	E-MEXP-475-raw-cel-680982512	-	-	-
12.6	99.3	GSM134516	Col-0_4day_dark_+lincomycin_rep2	GSE5759	red illumination w/o lincomycin
12.6	99.3	GSM134517	Col-0_4day_red illumination_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
12.5	99.3	GSM158701	HY213-MOCK-REP1	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
12.5	99.3	GSM142772	AM002_ATH1_A7-MCCOR-GFB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
12.4	99.3	GSM282701	Col_mock_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
12.3	99.3	GSM128659	Underwood_1-12_Mock-Inoculum-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.3	99.3	GSM128653	Underwood_1-6_Cor-hrpS-10e6-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.2	99.3	GSM134518	Col-0_4day_red illumination_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
12.2	99.3	GSM292076	Wt, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
12.1	99.3	GSM282702	Col_mock_rep3	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
12.0	99.3	GSM226273	YHB_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
11.8	99.3	ArrayExpress	E-MEXP-1112-raw-cel-1590665325	-	-	-
11.7	99.3	GSM282700	Col_mock_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
11.6	99.3	GSM134514	Col-0_4day_dark_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
11.6	99.3	GSM245916	wild type dark replicate 1	GSE9728	COP9 signalosome (csn) mutant analysis
11.5	99.3	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
11.5	99.3	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
11.4	99.3	ArrayExpress	E-TABM-63-raw-cel-681137195	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
10.8	99.2	GSM158704	HY213-MOCK-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
10.7	99.2	ArrayExpress	E-MEXP-475-raw-cel-680982458	-	-	-
10.7	99.2	ArrayExpress	E-TABM-63-raw-cel-681137124	-	-	-
10.6	99.2	GSM158706	WT-ESTRADIOL-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
10.6	99.2	ArrayExpress	E-MEXP-475-raw-cel-680982467	-	-	-
10.6	99.2	GSM319209	Dark-grown WT control (vector#4)	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
10.4	99.2	GSM134515	Col-0_4day_dark_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
10.4	99.2	GSM253197	RGA-GR-MOCK-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
10.3	99.2	ArrayExpress	Rente_1-1_WS2-HO_Rep1_ATH1	-	-	-
10.3	99.2	GSM253157	2h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
10.3	99.2	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
10.2	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138820	-	-	-
10.2	99.2	GSM226280	YHB_Rc50_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.2	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
10.0	99.2	GSM27364	lec1-1 Rosette Leaf	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
9.9	99.1	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138919	-	-	-
9.8	99.1	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	GSM131193	AtGen_D-27_2-PS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	ArrayExpress	E-MEXP-838-raw-cel-1160704054	-	-	-
9.7	99.1	GSM226275	YHB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.6	99.1	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.6	99.1	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.5	99.1	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.5	99.1	GSM226274	YHB_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.4	99.1	ArrayExpress	E-MEXP-838-raw-cel-1160703990	-	-	-
9.3	99.1	GSM245474	9 hr Hypoxia Stress IP RNA Rep 1	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
9.3	99.1	GSM157377	Truman_1-5_Pst-DC3000(hrpA)-4hpi_Rep2_ATH1	GSE6831	Systemic response to avirulent bacterial infection
9.3	99.1	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.3	99.1	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM133402	Knight_2-4_sfr6-dk_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
9.2	99.1	GSM77187	16h pgm (Col-0) mutant replicate A	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
9.2	99.1	GSM142773	AM002_ATH1_A8-MCCOR-GDB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
9.1	99.1	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.1	99.1	GSM253194	RGA-GR-DEX-REP1	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
9.1	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138655	-	-	-
9.0	99.1	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM158705	HY213-ESTRADIOL-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
8.8	99.0	ArrayExpress	E-MEXP-475-raw-cel-680982476	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-1299-raw-cel-1519902420	-	-	-
8.7	99.0	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	ArrayExpress	E-ATMX-28-raw-cel-1441104853	-	-	-
8.7	99.0	GSM77177	04h low CO2 + dark replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
8.6	99.0	GSM131216	AtGen_D-26_1-FS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments

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