Specifically-expressed experiments

Gene ID	At5g20220
Gene name	zinc knuckle (CCHC-type) family protein
Functional description	F:unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding;P:protein folding;C:unknown;VMFOPB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
41.4	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.9	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
32.4	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.3	99.7	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
29.2	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.9	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.6	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3	99.7	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.2	99.7	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.8	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.7	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
25.7	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.5	99.7	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
24.3	99.6	ArrayExpress	E-ATMX-33-raw-cel-1562596264	-	-	-
23.9	99.6	GSM318332	ML_35DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
23.4	99.6	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
20.8	99.6	GSM38668	NSNP	GSE2268	Arabidopsis polysome microarray
19.4	99.6	GSM237294	Shoot Selenate rep1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
19.4	99.6	ArrayExpress	E-ATMX-33-raw-cel-1562596310	-	-	-
18.8	99.5	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
18.5	99.5	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.4	99.5	GSM131303	AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
18.3	99.5	GSM131304	AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
18.2	99.5	GSM318345	ML_35DAS_2	GSE12676	Arabidopsis thaliana Ler developmental series
18.2	99.5	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
17.9	99.5	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.8	99.5	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.5	99.5	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
16.6	99.5	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.1	99.5	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.1	99.4	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.8	99.4	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.8	99.4	GSM38670	DSNP	GSE2268	Arabidopsis polysome microarray
12.6	99.3	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.4	99.3	GSM245919	csn3-1 mutant dark replicate 1	GSE9728	COP9 signalosome (csn) mutant analysis
11.3	99.3	ArrayExpress	E-MEXP-1443-raw-cel-1581869573	-	-	-
11.3	99.3	GSM131468	AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
11.2	99.2	GSM318330	EL_14DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
10.9	99.2	GSM237293	Shoot control rep2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
10.8	99.2	GSM131256	AtGen_6-0612_Control-Shoots-24.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.5	99.2	ArrayExpress	Evans_2-8_35s-FAD3-cold_ATH1	-	-	-
10.4	99.2	GSM131435	AtGen_6-8611_Woundingstress-Shoots-24.0h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
10.4	99.2	GSM237295	Shoot Selenate rep2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
10.0	99.2	GSM131327	AtGen_6-3611_Saltstress-Shoots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.7	99.1	ArrayExpress	E-MEXP-557-raw-cel-879731502	-	-	-
9.6	99.1	GSM131391	AtGen_6-7211_UV-Bstress-Shoots-1.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.6	99.1	ArrayExpress	Evans_2-4_fab1-mut-cold_ATH1	-	-	-
9.6	99.1	GSM133399	Knight_2-1_wildtype-lt_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
9.5	99.1	GSM133822	Walters_A-01-Kruger-WL1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
9.4	99.1	GSM133826	Walters_A-05-Kruger-WH2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
9.1	99.1	GSM133401	Knight_2-2_wildtype-dk_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
9.1	99.1	ArrayExpress	Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-550-raw-cel-871342382	-	-	-
8.7	99.0	ArrayExpress	E-ATMX-33-raw-cel-1562596288	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-557-raw-cel-879731511	-	-	-

Back to the CoP portal site

Back to the KAGIANA project homepage