| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 23.7 | 99.6 | GSM268247 | WT-drought-1, biological rep 1 | GSE10643 | Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress. |  |
| 18.0 | 99.5 | GSM253163 | 24h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 17.6 | 99.5 | GSM245494 | 9 hr Hypoxia Stress IP RNA Rep 3 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 16.8 | 99.5 | GSM245474 | 9 hr Hypoxia Stress IP RNA Rep 1 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 16.4 | 99.5 | GSM253164 | 24h into an extended nightC | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 16.3 | 99.5 | GSM253161 | 8h into an extended nightA | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 15.2 | 99.4 | GSM253160 | 6h into an extended night | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 15.2 | 99.4 | GSM253158 | 4h into an extended nightA | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 15.1 | 99.4 | GSM245472 | 2 hr Hypoxia Stress IP RNA Rep 1 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 15.0 | 99.4 | GSM253166 | 48h into an extended nightC | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 14.0 | 99.4 | GSM282697 | Col_BRZ_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 13.9 | 99.4 | GSM62704 | arf6 arf8 flowers_stage 13-14 | GSE2848 | Auxin Response Factor mediated flower gene expression | |
| 13.8 | 99.4 | GSM253165 | 48h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 13.6 | 99.4 | GSM253162 | 8h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 13.5 | 99.4 | GSM245469 | 9 hr Hypoxia Stress Total RNA Rep 1 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 13.2 | 99.4 | GSM245492 | 2 hr Hypoxia Stress IP RNA Rep 3 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 13.1 | 99.4 | GSM245484 | 9 hr Hypoxia Stress IP RNA Rep 2 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 13.0 | 99.4 | GSM10477 | lec1-1 24-Hr Seed 1 | GSE1051 | Seed development in LEAFY COTYLEDON1 mutants | |
| 12.9 | 99.3 | GSM282698 | Col_BRZ_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 12.8 | 99.3 | GSM253159 | 4h into an extended nightB | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 12.7 | 99.3 | GSM253198 | RGA-GR-DEX-REP3 | GSE10019 | Identification of RGA downstream genes by using steroid-inducible system | |
| 11.8 | 99.3 | GSM142664 | NE001_ATH1_A2-Evans-w30 | GSE6154 | Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis | |
| 11.8 | 99.3 | ArrayExpress | E-MEXP-513-raw-cel-829814430 | - | - | - |
| 11.4 | 99.3 | GSM245479 | 9 hr Hypoxia Stress Total RNA Rep 2 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 11.2 | 99.2 | GSM245467 | 2 hr Hypoxia Stress Total RNA Rep 1 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 11.0 | 99.2 | ArrayExpress | Capper_1-11_E10_estradiol | - | - | - |
| 11.0 | 99.2 | GSM77180 | 04h low CO2 + dark replicate B | GSE3423 | Carbon fixation (endogenous sugar) and light-dependent gene expression | |
| 10.9 | 99.2 | ArrayExpress | E-MEXP-513-raw-cel-829814446 | - | - | - |
| 10.8 | 99.2 | GSM319202 | Light-grown WT control (vector#4) | GSE12729 | Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings | |
| 10.3 | 99.2 | ArrayExpress | E-MEXP-838-raw-cel-1160703990 | - | - | - |
| 10.1 | 99.2 | ArrayExpress | E-MEXP-1468-raw-cel-1591138952 | - | - | - |
| 10.1 | 99.2 | GSM245487 | 2 hr Hypoxia Stress Total RNA Rep 3 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 10.0 | 99.2 | ArrayExpress | E-MEXP-1468-raw-cel-1591139018 | - | - | - |
| 10.0 | 99.2 | GSM253196 | RGA-GR-DEX-REP2 | GSE10019 | Identification of RGA downstream genes by using steroid-inducible system | |
| 10.0 | 99.2 | GSM10478 | lec1-1 24-Hr Seed 2 | GSE1051 | Seed development in LEAFY COTYLEDON1 mutants | |
| 9.8 | 99.1 | GSM282699 | Col_BRZ_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 9.8 | 99.1 | GSM133400 | Knight_2-3_sfr6-lt_Rep1_ATH1 | GSE5710 | Dark-induced gene expression in sfr6 | |
| 9.6 | 99.1 | GSM131493 | ATGE_101_B | GSE5629 | AtGenExpress: Developmental series (seedlings and whole plants) | |
| 9.6 | 99.1 | GSM245489 | 9 hr Hypoxia Stress Total RNA Rep 3 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 9.5 | 99.1 | GSM245477 | 2 hr Hypoxia Stress Total RNA Rep 2 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 9.5 | 99.1 | ArrayExpress | Capper_1-7_D9_estradiol | - | - | - |
| 9.5 | 99.1 | ArrayExpress | Capper_1-10_E6_water | - | - | - |
| 9.5 | 99.1 | ArrayExpress | E-MEXP-838-raw-cel-1160703895 | - | - | - |
| 9.4 | 99.1 | ArrayExpress | E-MEXP-1299-raw-cel-1519903848 | - | - | - |
| 9.4 | 99.1 | ArrayExpress | E-MEXP-838-raw-cel-1160704054 | - | - | - |
| 9.4 | 99.1 | GSM77182 | 00h pgm (Col-0) mutant replicate B | GSE3424 | Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0) | |
| 9.4 | 99.1 | GSM282703 | arf2_brz_2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 9.3 | 99.1 | GSM253157 | 2h into an extended night | GSE10016 | Expression data of Arabidopsis thaliana rosettes in an extended night | |
| 9.2 | 99.1 | ArrayExpress | E-MEXP-1094-raw-cel-1379507513 | - | - | - |
| 9.1 | 99.1 | GSM290755 | root - 01% oxygen - 2h - F | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 9.1 | 99.1 | ArrayExpress | E-MEXP-513-raw-cel-829814462 | - | - | - |
| 8.7 | 99.0 | GSM282695 | arf2_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings | |
| 8.7 | 99.0 | GSM77178 | 04h low CO2 + light replicate B | GSE3423 | Carbon fixation (endogenous sugar) and light-dependent gene expression | |
| 8.7 | 99.0 | ArrayExpress | E-MEXP-1468-raw-cel-1591138919 | - | - | - |
| 8.7 | 99.0 | GSM206277 | Wild type, water treatment, biological rep1 | GSE8319 | A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis | |
| 8.6 | 99.0 | ArrayExpress | E-MEXP-1468-raw-cel-1591138985 | - | - | - |
