Specifically-expressed experiments

Gene ID	At5g18060
Gene name	auxin-responsive protein, putative
Functional description	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
277.4	100.0	GSM173447	oxt6 mutant, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
156.8	99.9	GSM173446	oxt6 mutant, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
128.4	99.9	GSM173445	oxt6 mutant, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
51.9	99.8	GSM292078	Wt, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
48.8	99.8	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
48.6	99.8	ArrayExpress	E-MEXP-715-raw-cel-1121836221	-	-	-
45.1	99.8	GSM292077	Wt, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
42.6	99.8	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
39.8	99.8	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
39.6	99.8	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
36.7	99.7	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
36.2	99.7	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
35.8	99.7	GSM292081	pif1-2, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
35.2	99.7	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
34.6	99.7	GSM173443	wild-type Arabidopsis, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
32.1	99.7	GSM292076	Wt, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
31.4	99.7	GSM247627	Col-0-SH-rep1	GSE9816	Gene expression profiling of sav mutants
30.1	99.7	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
29.3	99.7	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
29.0	99.7	GSM133859	Beynon_1-2-cat-SpikeMix2_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
27.8	99.7	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
26.3	99.7	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
25.9	99.7	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
25.0	99.6	GSM173442	wild-type Arabidopsis, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
24.8	99.6	GSM133865	Beynon_1-8-cat-ReferenceMix_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
24.5	99.6	GSM133862	Beynon_1-5-cat-SpikeMix5_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
24.2	99.6	ArrayExpress	E-MEXP-1608-raw-cel-1620686957	-	-	-
24.1	99.6	GSM247640	Col-0-SH-rep3	GSE9816	Gene expression profiling of sav mutants
23.8	99.6	GSM139895	WT_non-polysome_rep1	GSE6024	eif3h/WT polysome loading
23.4	99.6	GSM133858	Beynon_1-1-cat-SpikeMix1_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
23.3	99.6	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
23.2	99.6	GSM133860	Beynon_1-3-cat-SpikeMix3_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
23.1	99.6	GSM173444	wild-type Arabidopsis, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
22.6	99.6	GSM247634	Col-0-SH-rep2	GSE9816	Gene expression profiling of sav mutants
22.1	99.6	ArrayExpress	E-MEXP-1608-raw-cel-1620687021	-	-	-
22.1	99.6	GSM131189	AtGen_D-22_2-AL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
21.6	99.6	GSM133863	Beynon_1-6-cat-SpikeMix6_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
21.4	99.6	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
21.1	99.6	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
21.0	99.6	GSM247630	sav1-1-SH-rep1	GSE9816	Gene expression profiling of sav mutants
20.7	99.6	GSM133861	Beynon_1-4-cat-SpikeMix4_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
18.6	99.5	ArrayExpress	E-MEXP-715-raw-cel-1121836113	-	-	-
18.5	99.5	ArrayExpress	E-MEXP-265-raw-cel-414619001	-	-	-
18.5	99.5	GSM247636	sav1-1-SH-rep2	GSE9816	Gene expression profiling of sav mutants
18.4	99.5	GSM142824	PJ002_ATH1_A5-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
18.0	99.5	GSM133864	Beynon_1-7-cat-SpikeMix7_Rep1_ATH1	GSE5739	Comparison of CATMA, Affymetrix and Agilent arrays
18.0	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
17.8	99.5	ArrayExpress	E-MEXP-1299-raw-cel-1519902994	-	-	-
17.5	99.5	GSM142823	PJ002_ATH1_A4-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
17.4	99.5	ArrayExpress	E-MEXP-1299-raw-cel-1519901036	-	-	-
17.0	99.5	GSM142887	MW001_ATH1_A1-Wheel-a14	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
17.0	99.5	ArrayExpress	E-MEXP-1608-raw-cel-1620686965	-	-	-
16.2	99.5	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
16.2	99.5	ArrayExpress	E-MEXP-715-raw-cel-1121836087	-	-	-
15.8	99.5	GSM142820	PJ002_ATH1_A1-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
15.8	99.5	GSM128705	Shirras_3-2_LabCalcifuge-1mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
15.6	99.5	GSM131104	Broadley_1-2_A2-Bo-P-phosphate-starved_Rep1_ATH1	GSE5614	Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
15.4	99.5	GSM157377	Truman_1-5_Pst-DC3000(hrpA)-4hpi_Rep2_ATH1	GSE6831	Systemic response to avirulent bacterial infection
15.3	99.4	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.1	99.4	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
15.1	99.4	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.9	99.4	GSM157311	Hammond_3-1_Control-shoot_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
14.5	99.4	GSM142604	BD001_ATH1_A8-Davie-HET_repeat	GSE6149	Targets of the mci genes.
14.3	99.4	GSM142827	PJ002_ATH1_A8-jarvis-B1798	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
14.1	99.4	ArrayExpress	E-MEXP-443-raw-cel-669122945	-	-	-
13.8	99.4	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.6	99.4	ArrayExpress	E-MEXP-1468-raw-cel-1591138655	-	-	-
13.5	99.4	GSM131106	Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1	GSE5614	Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
13.5	99.4	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.4	99.4	ArrayExpress	E-MEXP-809-raw-cel-1123684124	-	-	-
13.2	99.4	ArrayExpress	E-ATMX-27-raw-cel-1441080572	-	-	-
13.1	99.4	GSM134516	Col-0_4day_dark_+lincomycin_rep2	GSE5759	red illumination w/o lincomycin
13.1	99.4	GSM247642	sav1-1-SH-rep3	GSE9816	Gene expression profiling of sav mutants
12.9	99.3	GSM142826	PJ002_ATH1_A7-jarvis-B1798	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
12.7	99.3	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.5	99.3	GSM142589	JB001_ATH1_A3-1-Boyce-Kan-3	GSE6147	The role of Cdpk6 in development
12.5	99.3	GSM226268	WT(Ler)_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
12.4	99.3	ArrayExpress	E-ATMX-27-raw-cel-1441080588	-	-	-
12.2	99.3	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.2	99.3	GSM94008	A1-1 second repeat	GSE4113	Arabidopsis plants with altered levels of alternative oxidase
12.2	99.3	ArrayExpress	E-ATMX-27-raw-cel-1441080620	-	-	-
12.0	99.3	GSM157376	Truman_1-4_Pst-DC3000-4hpi_Rep2_ATH1	GSE6831	Systemic response to avirulent bacterial infection
11.9	99.3	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.9	99.3	GSM226271	phyAphyB_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
11.7	99.3	ArrayExpress	E-MEXP-809-raw-cel-1123684107	-	-	-
11.5	99.3	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
11.5	99.3	GSM142897	MW001_ATH1_A3-Wheel-w14	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
11.3	99.3	GSM142825	PJ002_ATH1_A6-jarvis-iae2	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
11.2	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519903338	-	-	-
11.2	99.2	GSM142599	BD001_ATH1_A3-DAVIE-T13	GSE6149	Targets of the mci genes.
11.2	99.2	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
11.1	99.2	GSM128707	Shirras_3-4_LabCalcifuge-12.5mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
10.8	99.2	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.8	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519903496	-	-	-
10.8	99.2	GSM133785	Brueggemann_A-3-Brueg-vis_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
10.8	99.2	GSM134515	Col-0_4day_dark_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
10.7	99.2	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.5	99.2	GSM128810	Mukhtar_1-2_XVE-ETL_Rep1_ATH1	GSE5537	Targets of AtWRKY27 in Arabidopsis leaves
10.4	99.2	GSM142597	BD001_ATH1_A1-DAVIE-CON	GSE6149	Targets of the mci genes.
10.4	99.2	ArrayExpress	E-MEXP-1304-raw-cel-1530620422	-	-	-
10.3	99.2	GSM142821	PJ002_ATH1_A2-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
10.3	99.2	GSM226269	WT(Ler)_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.2	99.2	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
10.2	99.2	GSM142601	BD001_ATH1_A5-DAVIE-T14	GSE6149	Targets of the mci genes.
10.1	99.2	ArrayExpress	E-MEXP-443-raw-cel-669122936	-	-	-
10.1	99.2	GSM142822	PJ002_ATH1_A3-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
9.8	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138820	-	-	-
9.7	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836005	-	-	-
9.7	99.1	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.7	99.1	GSM226272	phyAphyB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
9.7	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121835979	-	-	-
9.6	99.1	GSM157300	JPritchard_A-2_CTR_Rep2_ATH1	GSE6823	The molecular basis of plant insect interactions
9.5	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
9.5	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138952	-	-	-
9.5	99.1	GSM128716	Pieterse_1-2_Control-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
9.4	99.1	ArrayExpress	E-ATMX-27-raw-cel-1441080556	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-1304-raw-cel-1530620221	-	-	-
9.3	99.1	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.3	99.1	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM128657	Underwood_1-10_Mock-Inoculum-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.2	99.1	ArrayExpress	E-MEXP-1608-raw-cel-1620686997	-	-	-
9.2	99.1	GSM94014	S5 second repeat	GSE4113	Arabidopsis plants with altered levels of alternative oxidase
9.1	99.1	GSM142600	BD001_ATH1_A4-DAVIE-T13	GSE6149	Targets of the mci genes.
9.1	99.1	GSM282701	Col_mock_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
9.0	99.1	GSM142828	PJ002_ATH1_A9-jarvis-B1798	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
8.7	99.0	GSM134514	Col-0_4day_dark_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
8.7	99.0	GSM157303	JPritchard_A-5_API_Rep2_ATH1	GSE6823	The molecular basis of plant insect interactions
8.7	99.0	ArrayExpress	E-ATMX-27-raw-cel-1441080636	-	-	-
8.7	99.0	GSM226267	WT(Ler)_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
8.6	99.0	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
8.6	99.0	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

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