Specifically-expressed experiments

Gene ID At5g15980
Gene name pentatricopeptide (PPR) repeat-containing protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMBF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
60.399.8GSM133975Birnbaum_1-5_StageI-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
53.399.8GSM133974Birnbaum_1-4_StageI-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
38.099.8GSM265418Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
30.699.7GSM265426Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
30.199.7GSM265427Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
28.699.7GSM265419Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
27.599.7GSM133979Birnbaum_1-9_StageII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
22.699.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.999.6GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
18.599.5GSM252679Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
18.199.5GSM184831Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
17.999.5GSM184902Arabidopsis, root cells, stele, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
17.699.5GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
15.699.5GSM184529Stele root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.399.4GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
14.499.4GSM226544Slice2JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.399.4GSM226532L2SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.399.4GSM299337Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
14.299.4GSM252685Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
14.199.4GSM252688Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
14.099.4GSM184833Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
13.999.4GSM252686Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
13.799.4GSM299334Wild Type Germinating Seeds With Uniconazole Treatment Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.799.4GSM184528Stele root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.799.4GSM299408pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.699.4GSM252665Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
13.699.4GSM184840Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
13.699.4GSM184832Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
13.599.4GSM299321Wild Type Germinating Seeds With Solvent Treatment Only Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.299.4GSM265421Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
12.899.3GSM184522Stele root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.899.3GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
12.699.3GSM299410pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
12.399.3GSM252684Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
12.399.3GSM133977Birnbaum_1-7_StageI-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
12.299.3GSM133976Birnbaum_1-6_StageI-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
12.299.3GSM299336Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
12.199.3GSM299335Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.899.3GSM184842Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
11.599.3GSM299333Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.499.3GSM184839Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
11.399.3GSM184889Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
11.199.2GSM299409pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.999.2GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.699.2GSM252667Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
10.699.2GSM184834Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
10.699.2GSM299330pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.599.2GSM252682Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
10.599.2GSM184901Arabidopsis, root cells, stele, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.599.2GSM184525Stele root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.499.2GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.499.2GSM299328pkl Mutant Germinating Seeds With Solvent Treatment Only Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.399.2GSM299338Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.299.2GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.299.2GSM265420Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
10.199.2GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
10.099.2GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.099.2GSM299332pkl Mutant Germinating Seeds With Solvent Treatment Only Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.899.1GSM299322Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.799.1GSM299341pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.799.1GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
9.399.1GSM252666Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.299.1GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.199.1GSM184524Stele root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.099.1GSM299331pkl Mutant Germinating Seeds With Solvent Treatment Only Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
8.999.0GSM184890Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.799.0GSM299324Wild Type Germinating Seeds With Solvent Treatment Only Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
8.699.0GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.699.0GSM252672Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage