CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At5g15960

Gene name KIN1

Functional description cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.7 99.7 GSM173444 wild-type Arabidopsis, biological rep3 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
26.9 99.7 ArrayExpress E-MEXP-509-raw-cel-829148561 - - -
23.5 99.6 GSM173442 wild-type Arabidopsis, biological rep1 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
21.9 99.6 GSM173443 wild-type Arabidopsis, biological rep2 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
19.4 99.6 ArrayExpress E-MEXP-509-raw-cel-829148240 - - -
18.8 99.5 ArrayExpress E-MEXP-509-raw-cel-829148492 - - -
18.1 99.5 ArrayExpress E-MEXP-509-raw-cel-829148313 - - -
17.6 99.5 ArrayExpress E-MEXP-509-raw-cel-829148632 - - -
17.4 99.5 ArrayExpress E-MEXP-509-raw-cel-829148597 - - -
16.4 99.5 GSM128794 Zarka_1-6_MT-WT24HB_Rep2_ATH1 GSE5534 Response to cold, plate grown plants
15.6 99.5 GSM173446 oxt6 mutant, biological rep2 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
15.6 99.5 GSM128808 Zarka_3-4_MT-E2A_Rep1_ATH1 GSE5536 Response to CBF2 expression
15.4 99.5 GSM268245 dor-drought-1, biological rep 1 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
15.3 99.4 ArrayExpress E-MEXP-509-raw-cel-829148129 - - -
15.3 99.4 ArrayExpress E-MEXP-509-raw-cel-829148456 - - -
15.1 99.4 GSM128807 Zarka_3-3_MT-E24B_Rep1_ATH1 GSE5536 Response to CBF2 expression
14.8 99.4 ArrayExpress E-MEXP-509-raw-cel-829148201 - - -
14.5 99.4 GSM173449 oxt6:AtCPSF30 line 5, biological rep2 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
14.5 99.4 GSM106909 opr3-JA_2 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
14.0 99.4 ArrayExpress E-MEXP-509-raw-cel-829148772 - - -
14.0 99.4 ArrayExpress E-MEXP-509-raw-cel-829148525 - - -
13.9 99.4 GSM106910 opr3_JA_2 hrs_rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
13.7 99.4 GSM173445 oxt6 mutant, biological rep1 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
13.6 99.4 GSM106934 opr3_OPDA_8 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
13.6 99.4 ArrayExpress E-MEXP-509-raw-cel-829148348 - - -
13.4 99.4 ArrayExpress E-MEXP-509-raw-cel-829148877 - - -
13.3 99.4 ArrayExpress E-MEXP-509-raw-cel-829148276 - - -
12.8 99.3 GSM106923 opr3_OPDA_2 hrs_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
12.4 99.3 ArrayExpress E-ATMX-30-raw-cel-1513696808 - - -
12.2 99.3 ArrayExpress E-MEXP-509-raw-cel-829148913 - - -
12.2 99.3 GSM106967 opr3_OPDA_22 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
12.1 99.3 GSM106907 opr3_JA_0.5 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.6 99.3 GSM106919 opr3_OPDA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.6 99.3 ArrayExpress E-MEXP-509-raw-cel-829148165 - - -
11.4 99.3 ArrayExpress E-MEXP-1443-raw-cel-1581869688 - - -
11.2 99.2 GSM106920 opr3_OPDA_0.5 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.0 99.2 GSM173448 oxt6:AtCPSF30 line 5, biological rep1 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
10.9 99.2 ArrayExpress E-ATMX-30-raw-cel-1513696906 - - -
10.9 99.2 ArrayExpress E-MEXP-509-raw-cel-829148808 - - -
10.8 99.2 GSM173447 oxt6 mutant, biological rep3 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
10.8 99.2 GSM106833 opr3_JA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.7 99.2 ArrayExpress E-MEXP-509-raw-cel-829148738 - - -
10.5 99.2 GSM106915 opr3_JA_22 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.5 99.2 ArrayExpress E-MEXP-509-raw-cel-829148420 - - -
10.1 99.2 GSM106827 opr3_0 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.1 99.2 GSM173450 oxt6:AtCPSF30 line 6, biological rep1 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
9.8 99.1 GSM128795 Zarka_1-7_MT-WT7DA_Rep1_ATH1 GSE5534 Response to cold, plate grown plants
9.6 99.1 ArrayExpress E-ATMX-30-raw-cel-1513696830 - - -
9.6 99.1 GSM106922 opr3_OPDA_2 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.5 99.1 ArrayExpress E-MEXP-1345-raw-cel-1559561259 - - -
9.4 99.1 GSM106969 opr3_OPDA_22 hrs_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.4 99.1 GSM173451 oxt6:AtCPSF30 line 6, biological rep2 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
9.3 99.1 GSM106825 opr3_0 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.2 99.1 GSM106913 opr3_JA_8 hrs_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1 99.1 GSM106912 opr3_JA 8hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1 99.1 ArrayExpress E-MEXP-509-raw-cel-829148842 - - -
9.1 99.1 GSM131282 AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
9.0 99.1 GSM106828 opr3_0 hr_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7 99.0 GSM106908 opr3_JA_0.5 hr_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7 99.0 GSM232885 Wt.3-1.90 GSE9201 Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.7	99.7	GSM173444	wild-type Arabidopsis, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
26.9	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148561	-	-	-
23.5	99.6	GSM173442	wild-type Arabidopsis, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
21.9	99.6	GSM173443	wild-type Arabidopsis, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
19.4	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148240	-	-	-
18.8	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148492	-	-	-
18.1	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148313	-	-	-
17.6	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148632	-	-	-
17.4	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148597	-	-	-
16.4	99.5	GSM128794	Zarka_1-6_MT-WT24HB_Rep2_ATH1	GSE5534	Response to cold, plate grown plants
15.6	99.5	GSM173446	oxt6 mutant, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
15.6	99.5	GSM128808	Zarka_3-4_MT-E2A_Rep1_ATH1	GSE5536	Response to CBF2 expression
15.4	99.5	GSM268245	dor-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
15.3	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148129	-	-	-
15.3	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148456	-	-	-
15.1	99.4	GSM128807	Zarka_3-3_MT-E24B_Rep1_ATH1	GSE5536	Response to CBF2 expression
14.8	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148201	-	-	-
14.5	99.4	GSM173449	oxt6:AtCPSF30 line 5, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
14.5	99.4	GSM106909	opr3-JA_2 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
14.0	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148772	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148525	-	-	-
13.9	99.4	GSM106910	opr3_JA_2 hrs_rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
13.7	99.4	GSM173445	oxt6 mutant, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
13.6	99.4	GSM106934	opr3_OPDA_8 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
13.6	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148348	-	-	-
13.4	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148877	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148276	-	-	-
12.8	99.3	GSM106923	opr3_OPDA_2 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
12.4	99.3	ArrayExpress	E-ATMX-30-raw-cel-1513696808	-	-	-
12.2	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148913	-	-	-
12.2	99.3	GSM106967	opr3_OPDA_22 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
12.1	99.3	GSM106907	opr3_JA_0.5 hr_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.6	99.3	GSM106919	opr3_OPDA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.6	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148165	-	-	-
11.4	99.3	ArrayExpress	E-MEXP-1443-raw-cel-1581869688	-	-	-
11.2	99.2	GSM106920	opr3_OPDA_0.5 hr_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.0	99.2	GSM173448	oxt6:AtCPSF30 line 5, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
10.9	99.2	ArrayExpress	E-ATMX-30-raw-cel-1513696906	-	-	-
10.9	99.2	ArrayExpress	E-MEXP-509-raw-cel-829148808	-	-	-
10.8	99.2	GSM173447	oxt6 mutant, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
10.8	99.2	GSM106833	opr3_JA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.7	99.2	ArrayExpress	E-MEXP-509-raw-cel-829148738	-	-	-
10.5	99.2	GSM106915	opr3_JA_22 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.5	99.2	ArrayExpress	E-MEXP-509-raw-cel-829148420	-	-	-
10.1	99.2	GSM106827	opr3_0 hr_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.1	99.2	GSM173450	oxt6:AtCPSF30 line 6, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
9.8	99.1	GSM128795	Zarka_1-7_MT-WT7DA_Rep1_ATH1	GSE5534	Response to cold, plate grown plants
9.6	99.1	ArrayExpress	E-ATMX-30-raw-cel-1513696830	-	-	-
9.6	99.1	GSM106922	opr3_OPDA_2 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.5	99.1	ArrayExpress	E-MEXP-1345-raw-cel-1559561259	-	-	-
9.4	99.1	GSM106969	opr3_OPDA_22 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.4	99.1	GSM173451	oxt6:AtCPSF30 line 6, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
9.3	99.1	GSM106825	opr3_0 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.2	99.1	GSM106913	opr3_JA_8 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1	99.1	GSM106912	opr3_JA 8hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1	99.1	ArrayExpress	E-MEXP-509-raw-cel-829148842	-	-	-
9.1	99.1	GSM131282	AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.0	99.1	GSM106828	opr3_0 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7	99.0	GSM106908	opr3_JA_0.5 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7	99.0	GSM232885	Wt.3-1.90	GSE9201	Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5

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Gene ID	At5g15960
Gene name	KIN1
Functional description	cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.