Specifically-expressed experiments

Gene ID	At5g15850
Gene name	COL1 (constans-like 1)
Functional description	Homologous to the flowering-time gene CONSTANS.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
56.5	99.8	GSM131280	AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
53.9	99.8	GSM131279	AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
50.6	99.8	GSM74901	Wildtype_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
39.3	99.8	ArrayExpress	E-MEXP-1304-raw-cel-1530618308	-	-	-
37.5	99.7	GSM142803	SS001_ATH1_A6-Smith-8-45	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
34.8	99.7	GSM74900	Wildtype_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
34.0	99.7	ArrayExpress	E-MEXP-1304-raw-cel-1530618514	-	-	-
32.8	99.7	GSM77182	00h pgm (Col-0) mutant replicate B	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
32.3	99.7	ArrayExpress	E-MEXP-513-raw-cel-829814366	-	-	-
31.4	99.7	ArrayExpress	E-MEXP-513-raw-cel-829814382	-	-	-
29.8	99.7	GSM268247	WT-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
28.2	99.7	GSM253157	2h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
25.5	99.7	GSM74898	Wildtype_6H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
25.3	99.6	ArrayExpress	E-MEXP-475-raw-cel-680982413	-	-	-
23.6	99.6	ArrayExpress	E-MEXP-513-raw-cel-829814414	-	-	-
23.3	99.6	GSM245484	9 hr Hypoxia Stress IP RNA Rep 2	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
23.1	99.6	GSM131168	AtGen_C-18_3-Pi-24_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
23.0	99.6	GSM142814	SS002_ATH1_A6-smith-12h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
22.9	99.6	ArrayExpress	E-MEXP-1304-raw-cel-1530618478	-	-	-
22.4	99.6	ArrayExpress	Evans_2-2_col-WT-cold_ATH1	-	-	-
22.4	99.6	GSM245474	9 hr Hypoxia Stress IP RNA Rep 1	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
21.8	99.6	ArrayExpress	Evans_2-4_fab1-mut-cold_ATH1	-	-	-
21.6	99.6	ArrayExpress	E-MEXP-1344-raw-cel-1559561713	-	-	-
21.2	99.6	GSM74909	ice1_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
20.1	99.6	GSM77177	04h low CO2 + dark replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
20.1	99.6	GSM77180	04h low CO2 + dark replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
19.5	99.6	GSM245494	9 hr Hypoxia Stress IP RNA Rep 3	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
19.3	99.6	GSM128650	Underwood_1-3_Cor-10e6-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.3	99.6	GSM134775	Col-0_5day_+lincomycin_rep1	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
19.2	99.6	GSM62704	arf6 arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
18.8	99.5	GSM142804	SS001_ATH1_A7-Smith-10	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
18.5	99.5	ArrayExpress	E-MEXP-1304-raw-cel-1530619115	-	-	-
18.4	99.5	ArrayExpress	Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1	-	-	-
18.2	99.5	GSM128649	Underwood_1-2_Cor-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.0	99.5	GSM77055	00h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
18.0	99.5	GSM253154	end of the night A	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
17.0	99.5	GSM128802	Zarka_2-6_MT-24HCB(SOIL)_Rep2_ATH1	GSE5535	Response to cold, soil grown plants
16.8	99.5	GSM253155	end of the night B	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
16.7	99.5	GSM62703	arf6 arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
16.6	99.5	GSM133407	Bramke_A1-warre-WTC	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
16.5	99.5	GSM74908	ice1_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
16.5	99.5	GSM133405	Bramke_A5-warre-S2C	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
16.5	99.5	GSM253156	end of the night C	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
15.8	99.5	GSM253158	4h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
15.3	99.4	GSM142871	GW001_ATH1_A16-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.8	99.4	GSM128648	Underwood_1-1_Cor-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.7	99.4	GSM74906	ice1_6H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
14.4	99.4	ArrayExpress	E-MEXP-513-raw-cel-829814398	-	-	-
14.2	99.4	ArrayExpress	E-MEXP-475-raw-cel-680982521	-	-	-
14.1	99.4	GSM245493	9 hr Non-Stress IP RNA Rep 3	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
14.0	99.4	ArrayExpress	E-MEXP-185-raw-cel-358911662	-	-	-
14.0	99.4	GSM77181	00h pgm (Col-0) mutant replicate A	GSE3424	Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)
13.9	99.4	GSM128775	Eulgem_1-1_Col-0-untreated_Rep1_AG	GSE5532	Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2
13.5	99.4	ArrayExpress	E-ATMX-19-raw-cel-1375547530	-	-	-
13.3	99.4	GSM131541	ATGE_26_B	GSE5630	AtGenExpress: Developmental series (leaves)
13.2	99.4	GSM133888	Raghavan_1-2_1MM-1HR-A_Rep1_ATH1	GSE5743	Whole genome expression in response to herbicidal levels of 2,4-D application
13.2	99.4	GSM128801	Zarka_2-5_MT-24HCA(SOIL)_Rep1_ATH1	GSE5535	Response to cold, soil grown plants
13.0	99.4	ArrayExpress	E-MEXP-1299-raw-cel-1519901992	-	-	-
13.0	99.4	GSM265532	flu_dark 8hours/30 minute light_1	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
12.9	99.3	GSM265538	ex1ex2flu_dark 8hours/30 minute light_1	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
12.9	99.3	GSM131218	Scrase-Field_1-2_camta1-2-Col-0_Rep1_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
12.8	99.3	GSM131220	Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
12.8	99.3	GSM245475	9 hr Hypoxia Stress 1 hr recovery IP RNA Rep 1	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
12.7	99.3	GSM197145	S58-2_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
12.7	99.3	GSM265535	ex1_flu_dark 8hours/30 minute light_2	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
12.4	99.3	GSM197141	wt_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
12.3	99.3	GSM131167	AtGen_C-17_2-Pi-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
12.3	99.3	ArrayExpress	E-MEXP-1304-raw-cel-1530618685	-	-	-
12.1	99.3	GSM142868	GW001_ATH1_A13-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
12.0	99.3	GSM265534	ex1_flu_dark 8hours/30 minute light_1	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
12.0	99.3	GSM183506	WT_for_MYB29/76_rep3	GSE7570	ATR1_like_Clade_OE_and_miR
11.9	99.3	GSM297382	At.StarchSD.WTSS3.SS3R1L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
11.9	99.3	ArrayExpress	Evans_2-10_col-aeq-cold_ATH1	-	-	-
11.9	99.3	GSM275637	Ler_30min	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
11.9	99.3	GSM265539	ex1ex2flu_dark 8hours/30 minute light_2	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
11.8	99.3	GSM131166	AtGen_C-16_1-Pi-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
11.8	99.3	GSM134783	gun1-1_5day_+lincomycin_rep2	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
11.8	99.3	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.8	99.3	GSM245495	9 hr Hypoxia Stress 1 hr recovery IP RNA Rep 3	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
11.7	99.3	GSM142663	NE001_ATH1_A1-Evans-w20	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
11.7	99.3	GSM131219	Scrase-Field_1-3_Col-0-wildtype_Rep2_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
11.6	99.3	ArrayExpress	Evans_2-8_35s-FAD3-cold_ATH1	-	-	-
11.6	99.3	GSM265530	col_dark 8hours/30 minute light_1	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
11.5	99.3	GSM131542	ATGE_26_C	GSE5630	AtGenExpress: Developmental series (leaves)
11.5	99.3	GSM265533	flu_dark 8hours/30 minute light_2	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
11.5	99.3	ArrayExpress	E-ATMX-19-raw-cel-1375547479	-	-	-
11.4	99.3	ArrayExpress	Evans_2-1_col-WT-ambient_ATH1	-	-	-
11.3	99.3	GSM142867	GW001_ATH1_A12-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
11.3	99.3	GSM197142	aba3-1_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
11.3	99.3	ArrayExpress	E-ATMX-30-raw-cel-1513696675	-	-	-
11.2	99.2	ArrayExpress	E-MEXP-1345-raw-cel-1559561289	-	-	-
11.1	99.2	GSM77175	04h low CO2 + light replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
11.0	99.2	GSM318345	ML_35DAS_2	GSE12676	Arabidopsis thaliana Ler developmental series
11.0	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937524	-	-	-
11.0	99.2	GSM131540	ATGE_26_A	GSE5630	AtGenExpress: Developmental series (leaves)
10.9	99.2	GSM142869	GW001_ATH1_A14-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
10.9	99.2	GSM77056	00h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
10.8	99.2	GSM142866	GW001_ATH1_A11-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
10.8	99.2	GSM197146	S82-2_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
10.7	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519902420	-	-	-
10.7	99.2	GSM318332	ML_35DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
10.7	99.2	ArrayExpress	E-MEXP-1344-raw-cel-1559561683	-	-	-
10.6	99.2	GSM131217	Scrase-Field_1-1_Col-0-wildtype_Rep1_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
10.5	99.2	GSM226273	YHB_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.4	99.2	GSM142815	SS002_ATH1_A7-smith-13h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
10.4	99.2	GSM142666	NE001_ATH1_A4-Evans-m20	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
10.3	99.2	GSM133403	Bramke_A3-warre-S6C	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
10.3	99.2	GSM275642	flu_60min	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
10.3	99.2	ArrayExpress	E-MEXP-1345-raw-cel-1559561259	-	-	-
10.3	99.2	ArrayExpress	E-MEXP-185-raw-cel-358911886	-	-	-
10.0	99.2	GSM245473	9 hr Non-Stress IP RNA Rep 1	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
9.9	99.1	ArrayExpress	E-MEXP-185-raw-cel-358912110	-	-	-
9.8	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982377	-	-	-
9.8	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519901036	-	-	-
9.7	99.1	GSM297387	At.StarchSD.WTSS3.SS3R2L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
9.7	99.1	GSM128793	Zarka_1-5_MT-WT24HA_Rep1_ATH1	GSE5534	Response to cold, plate grown plants
9.7	99.1	GSM142865	GW001_ATH1_A10-Warre-Wca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
9.6	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519901564	-	-	-
9.5	99.1	ArrayExpress	E-ATMX-30-raw-cel-1513696731	-	-	-
9.5	99.1	GSM253159	4h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
9.5	99.1	GSM131408	AtGen_6-7612_UV-Bstress-Shoots-24.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.4	99.1	GSM142805	SS001_ATH1_A8-Smith-11	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.4	99.1	ArrayExpress	E-ATMX-19-raw-cel-1375547394	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-185-raw-cel-358912054	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982512	-	-	-
9.3	99.1	GSM265531	col_dark 8hours/30 minute light_2	GSE10509	EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana
9.3	99.1	GSM244457	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
9.2	99.1	ArrayExpress	E-ATMX-30-raw-cel-1513696778	-	-	-
9.2	99.1	GSM237295	Shoot Selenate rep2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
9.0	99.1	ArrayExpress	E-MEXP-185-raw-cel-358911774	-	-	-
9.0	99.1	GSM268245	dor-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
8.9	99.0	GSM275638	Ler_60min	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
8.9	99.0	GSM142870	GW001_ATH1_A15-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
8.8	99.0	GSM134767	abi4-102_5day_-lincomycin_rep1	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
8.8	99.0	ArrayExpress	E-MEXP-185-raw-cel-358911606	-	-	-
8.8	99.0	GSM128776	Eulgem_1-3_Col-0-MKK2-w.t.4_Rep1_AG	GSE5532	Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2
8.7	99.0	GSM253153	2h before the end of the night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
8.6	99.0	GSM133293	NO.30	GSE5698	AtGenExpress: Cytokinin treatment of seedlings

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