Specifically-expressed experiments

Gene ID	At5g14640
Gene name	SK13 (SHAGGY-LIKE KINASE 13)
Functional description	F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:response to salt stress, hyperosmotic response;C:cytosol;MPOFBVA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
43.9	99.8	GSM133758	Lindsey_1-11_heart-stage-root_Rep2_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
31.0	99.7	GSM133777	Lindsey_1-4_globular-basal_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
29.5	99.7	GSM242954	Mock day 1 (day1E2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
26.3	99.7	GSM242958	Mock day 3 (day3E2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
20.1	99.6	GSM242959	Steroid day 3 (day3D1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
19.6	99.6	ArrayExpress	E-TABM-52-raw-cel-1583683182	-	-	-
18.7	99.5	GSM242956	Steroid day 1 (day1D2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
17.7	99.5	GSM242955	Steroid day 1 (day1D1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
15.6	99.5	GSM242960	Steroid day 3 (day3D2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
14.8	99.4	GSM242957	Mock day 3 (day3E1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
14.1	99.4	GSM10442	WT Ovule 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
13.3	99.4	ArrayExpress	E-MEXP-1443-raw-cel-1581869573	-	-	-
13.2	99.4	GSM10477	lec1-1 24-Hr Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
12.8	99.3	GSM133737	Buchanan-Wollaston_A-9-bwoll-Co1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
12.8	99.3	GSM10441	WT Ovule 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
12.4	99.3	ArrayExpress	E-TABM-52-raw-cel-1583683598	-	-	-
12.1	99.3	GSM242953	Mock day 1 (day1E1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
12.1	99.3	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
12.0	99.3	GSM133769	Lindsey_1-21_torpedo-basal_Rep6_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
11.9	99.3	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
11.8	99.3	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.5	99.3	GSM133960	Fukuda_1-5_4A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.3	99.3	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.2	99.2	GSM133120	RIKEN-YAMAUCHI2B	GSE5687	AtGenExpress: Different temperature treatment of seeds
10.8	99.2	GSM133961	Fukuda_1-6_4B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.7	99.2	ArrayExpress	E-TABM-52-raw-cel-1583682926	-	-	-
10.7	99.2	GSM10478	lec1-1 24-Hr Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
10.6	99.2	GSM133963	Fukuda_1-8_6B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.4	99.2	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	GSM184904	Arabidopsis, root cells, protophloem, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.0	99.2	ArrayExpress	E-MEXP-475-raw-cel-680982422	-	-	-
9.9	99.1	GSM133731	Buchanan-Wollaston_A-3-bwoll-C0S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
9.8	99.1	GSM184479	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.8	99.1	GSM131537	ATGE_25_A	GSE5630	AtGenExpress: Developmental series (leaves)
9.7	99.1	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.6	99.1	GSM184906	Arabidopsis, root cells, protophloem, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.5	99.1	ArrayExpress	E-MEXP-728-raw-cel-1062073338	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982431	-	-	-
9.2	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982449	-	-	-
9.2	99.1	ArrayExpress	E-MEXP-550-raw-cel-871342517	-	-	-
9.2	99.1	GSM131603	ATGE_41_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.0	99.1	GSM133977	Birnbaum_1-7_StageI-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
8.9	99.0	GSM133964	Fukuda_1-9_8A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
8.9	99.0	ArrayExpress	E-MEXP-1443-raw-cel-1581869515	-	-	-
8.8	99.0	GSM133774	Lindsey_1-26_torpedo-meristem_Rep2_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.8	99.0	GSM317519	Apex_5DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
8.7	99.0	GSM10445	WT 24-Hr Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
8.7	99.0	GSM184525	Stele root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root

Back to the CoP portal site

Back to the KAGIANA project homepage