Specifically-expressed experiments

Gene ID At5g10040
Gene name unknown protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
268.2100.0GSM290753root - 01% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
246.1100.0GSM290755root - 01% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
238.5100.0GSM2454849 hr Hypoxia Stress IP RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
232.4100.0GSM142592DB001_ATH1_A2-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
205.1100.0GSM2454949 hr Hypoxia Stress IP RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
193.7100.0GSM2454749 hr Hypoxia Stress IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
141.399.9GSM2454799 hr Hypoxia Stress Total RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
139.699.9GSM142593DB001_ATH1_A3-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
124.099.9GSM142596DB001_ATH1_A6-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
122.899.9GSM2454899 hr Hypoxia Stress Total RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
112.199.9GSM142594DB001_ATH1_A4-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
99.299.9GSM40555Polysomal mRNA - Hypoxia stressGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
91.599.9GSM2454722 hr Hypoxia Stress IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
86.199.9GSM2454922 hr Hypoxia Stress IP RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
85.699.9GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
84.399.9GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
84.099.9GSM2454822 hr Hypoxia Stress IP RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
66.499.8GSM40553Total RNA - hypoxia stressGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
65.999.8GSM2454699 hr Hypoxia Stress Total RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
65.499.8GSM2454872 hr Hypoxia Stress Total RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
62.699.8GSM2454959 hr Hypoxia Stress 1 hr recovery IP RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
59.699.8GSM131346AtGen_6-4322_Droughtstress-Roots-3.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
56.899.8GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
55.699.8GSM2454859 hr Hypoxia Stress 1 hr recovery IP RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
53.399.8GSM131433AtGen_6-8524_Woundingstress-Roots-12.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
50.899.8GSM2454772 hr Hypoxia Stress Total RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
50.199.8GSM218592Whole roots 3.5hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
47.199.8GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
44.499.8GSM142591DB001_ATH1_A1-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
44.499.8GSM128693Heinekamp_1-2_control-root_Rep1_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
44.299.8GSM2454759 hr Hypoxia Stress 1 hr recovery IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
43.799.8GSM290761root - 04% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
41.899.8GSM290760root - 04% oxygen - 2h - DGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
39.699.8GSM2454909 hr Hypoxia Stress 1 hr recovery Total RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
39.399.8GSM131298AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
38.699.8GSM131302AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
38.099.8GSM131434AtGen_6-8525_Woundingstress-Roots-12.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
37.199.7GSM2454809 hr Hypoxia Stress 1 hr recovery Total RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
35.299.7GSM206281Chitin receptor mutant, chitooctaose treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
34.199.7GSM2454672 hr Hypoxia Stress Total RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
34.099.7GSM131249AtGen_6-0421_Control-Roots-6.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
33.499.7GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
32.599.7GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
31.599.7GSM206280Chitin receptor mutant, chitooctaose treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
31.399.7GSM206274Wild type, chitooctaose treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
29.499.7GSM131242AtGen_6-0322_Control-Roots-3.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
28.899.7GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
28.199.7GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
27.899.7GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
27.199.7GSM131241AtGen_6-0321_Control-Roots-3.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
26.299.7GSM128706Shirras_3-3_LabCalcicole-12.5mM-CaCl2_Rep1_ATH1GSE5523Environmental Genomics of Calcicole-calcifuge physiologyLink to GEO
25.899.7GSM206282Chitin receptor mutant, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
24.899.6GSM133719Deeken_A-1-Deeke-Tum_SLD_REP1GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
24.499.6GSM131345AtGen_6-4321_Droughtstress-Roots-3.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
19.899.6GSM131333AtGen_6-4721_Droughtstress-Roots-0.25h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
19.899.6GSM206275Wild type, chitooctaose treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
18.799.5GSM2454709 hr Hypoxia Stress 1 hr recovery Total RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
18.099.5GSM206276Wild type, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
17.699.5GSM131334AtGen_6-4722_Droughtstress-Roots-0.25h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
17.699.5GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.599.5GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
17.399.5GSM131425AtGen_6-8324_Woundingstress-Roots-3.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
17.099.5GSM184553Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.999.5GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
16.899.5GSM131237AtGen_6-0221_Control-Roots-1.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
16.499.5GSM131266AtGen_6-1222_Cold(4°C)-Roots-1.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
15.899.5GSM206279Wild type, water treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
15.099.4GSM184522Stele root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.999.4GSM133721Deeken_A-1-Deeke-Tum_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
14.899.4GSM206277Wild type, water treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
14.699.4ArrayExpressE-MEXP-1310-raw-cel-1534419166---
14.299.4GSM131265AtGen_6-1221_Cold(4°C)-Roots-1.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
12.699.3GSM245913csn5 (csn5a-2 csn5b) mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
12.699.3GSM206278Wild type, water treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
12.499.3GSM218596Whole roots 3.5hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.399.3GSM206284Chitin receptor mutant, water treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
11.699.3GSM131246AtGen_6-0822_Control-Roots-4.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
11.599.3ArrayExpressE-MEXP-1310-raw-cel-1534419084---
11.399.3GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.199.2GSM133868Cain_1-2_WT1_Rep2_ATH1GSE5740Polycomb Binding ProteinLink to GEO
10.999.2GSM128695Heinekamp_1-4_cs-root_Rep1_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
10.999.2GSM131269AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
10.599.2GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.599.2GSM131370AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
10.199.2GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.099.2GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.999.1GSM206285Chitin receptor mutant, water treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
9.899.1GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.699.1GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.399.1GSM131257AtGen_6-0621_Control-Roots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.299.1GSM206283Chitin receptor mutant, water treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
9.199.1GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
9.099.1GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.999.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.999.0GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM133283RIKEN-GODA4A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
8.799.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
8.799.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
8.799.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.799.0GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
8.799.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO



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