Specifically-expressed experiments

Gene ID At5g09480
Gene name hydroxyproline-rich glycoprotein family protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPVA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
276.8100.0ArrayExpressE-ATMX-1-raw-cel-1112746154---
186.1100.0ArrayExpressE-ATMX-1-raw-cel-1112746209---
138.799.9ArrayExpressE-ATMX-1-raw-cel-1112746095---
137.099.9GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
134.199.9GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
126.099.9GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
77.099.9GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
76.399.9ArrayExpressE-ATMX-1-raw-cel-1112746267---
74.499.9GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
70.899.9GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
65.199.8GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
43.899.8ArrayExpressE-MEXP-828-raw-cel-1156922905---
43.099.8GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
40.199.8ArrayExpressE-MEXP-828-raw-cel-1156922809---
37.799.7GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
36.499.7GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
35.899.7GSM184543Whole roots 2hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
35.699.7GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
35.199.7ArrayExpressE-MEXP-828-raw-cel-1156922891---
31.199.7ArrayExpressE-MEXP-828-raw-cel-1156922987---
30.499.7GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
30.099.7GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
30.099.7GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
28.199.7GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
27.699.7GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
26.999.7GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
26.699.7ArrayExpressE-MEXP-828-raw-cel-1156922968---
26.599.7GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
26.399.7GSM184553Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
26.399.7GSM142669SF002_ATH1_A7-Fille-ANGR4-12nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
25.299.6ArrayExpressE-MEXP-828-raw-cel-1156922846---
25.199.6GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
24.799.6ArrayExpressE-MEXP-828-raw-cel-1156922829---
24.699.6GSM218592Whole roots 3.5hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.499.6ArrayExpressE-MEXP-828-raw-cel-1156922944---
24.099.6ArrayExpressE-MEXP-828-raw-cel-1156922872---
24.099.6GSM291101root - 21% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
24.099.6GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
23.999.6GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
23.499.6GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
23.299.6GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
23.199.6GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
23.099.6GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
21.299.6GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.599.6GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
20.199.6GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
19.899.6GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
19.599.6GSM290753root - 01% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
19.299.6ArrayExpressE-MEXP-828-raw-cel-1156922923---
19.299.6GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
19.199.6GSM184533Protoplasted root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.099.5GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
18.699.5GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
18.199.5ArrayExpressE-MEXP-791-raw-cel-1122937623---
17.399.5GSM131457AtGen_6-9821_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
16.999.5GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
16.799.5GSM142671SF001_ATH1_A1-Fille-WT-nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
16.699.5ArrayExpressE-MEXP-722-raw-cel-1062243183---
16.599.5GSM142672SF001_ATH1_A2-Fille-WT-+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
16.599.5GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.499.5GSM131361AtGen_6-5121_Genotoxicstress-Roots-0.5h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.399.5GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
16.399.5GSM218596Whole roots 3.5hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.699.5GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
15.499.5GSM131406AtGen_6-7522_UV-Bstress-Roots-12.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
15.199.4GSM131442AtGen_6-9722_Heatstress-Roots-0.25h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
15.199.4GSM184559Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.799.4GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
14.799.4GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.699.4GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.499.4ArrayExpressE-ATMX-5-raw-cel-1303134304---
14.399.4GSM157325Hammond_3-18_Caesium-treated-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
14.299.4GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
14.199.4GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.099.4GSM184538Whole roots 2hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.999.4ArrayExpressE-MEXP-791-raw-cel-1122937587---
13.599.4GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
13.499.4GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
12.899.3GSM218593Whole roots 3.5hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.699.3ArrayExpressE-MEXP-635-raw-cel-912819840---
12.599.3ArrayExpressE-ATMX-5-raw-cel-1303134335---
12.499.3GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
12.499.3ArrayExpressE-MEXP-791-raw-cel-1122937605---
12.399.3GSM131374AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
12.399.3ArrayExpressE-MEXP-722-raw-cel-1062243108---
12.299.3GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
12.099.3GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
12.099.3GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
12.099.3GSM131458AtGen_6-9822_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
11.899.3GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
11.899.3GSM184560Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.799.3GSM131302AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
11.799.3GSM184935Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
11.699.3GSM184561Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM184557Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM131405AtGen_6-7521_UV-Bstress-Roots-12.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.699.3GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.599.3GSM184930Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
11.499.3GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
11.499.3GSM131469AtGen_6-9621_Heatstress(3h)+21hrecovery-Roots-24.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
11.399.3GSM184927Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
11.399.3GSM184544Whole roots 2hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.199.2GSM131366AtGen_6-5222_Genotoxicstress-Roots-1.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
10.999.2GSM131441AtGen_6-9721_Heatstress-Roots-0.25h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.999.2GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.899.2GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
10.899.2GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.599.2GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.499.2GSM131422AtGen_6-8225_Woundingstress-Roots-1.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
10.499.2GSM291023root - 08% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.499.2GSM131445AtGen_6-9121_Heatstress-Roots-0.5h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.399.2GSM142727CH001_ATH1_A006-Hampt-akbGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.299.2GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.299.2GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.199.2GSM131393AtGen_6-7221_UV-Bstress-Roots-1.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.999.1GSM131425AtGen_6-8324_Woundingstress-Roots-3.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
9.899.1GSM131437AtGen_6-8621_Woundingstress-Roots-24.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
9.899.1GSM131365AtGen_6-5221_Genotoxicstress-Roots-1.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.899.1ArrayExpressE-MEXP-791-raw-cel-1122937614---
9.799.1GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.799.1GSM131465AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.699.1GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.699.1GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.599.1GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.599.1ArrayExpressE-MEXP-722-raw-cel-1062243239---
9.599.1GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.599.1GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
9.499.1GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
9.499.1GSM131394AtGen_6-7222_UV-Bstress-Roots-1.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.499.1GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.499.1GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.499.1GSM184928Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
9.399.1ArrayExpressE-MEXP-722-raw-cel-1062243048---
9.399.1GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.199.1GSM131454AtGen_6-9322_Heatstress-Roots-3.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.099.1GSM131233AtGen_6-0121_Control-Roots-0.5h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
8.999.0GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.999.0ArrayExpressE-MEXP-722-raw-cel-1062242948---
8.899.0GSM131362AtGen_6-5122_Genotoxicstress-Roots-0.5h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
8.899.0ArrayExpressE-MEXP-791-raw-cel-1122937578---
8.899.0GSM131242AtGen_6-0322_Control-Roots-3.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
8.899.0GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
8.899.0GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
8.899.0GSM131430AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
8.799.0GSM131257AtGen_6-0621_Control-Roots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO



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