Specifically-expressed experiments

Gene ID At5g06800
Gene name myb family transcription factor
Functional description F:transcription factor activity;P:regulation of transcription;C:unknown;POFM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
229.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
204.5100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
179.3100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
86.599.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
73.299.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
43.799.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
37.599.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
36.499.7GSM179967Arabidopsis aux1 mutant roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
35.199.7GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
34.899.7GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
34.699.7GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.399.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
33.199.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.899.7GSM131557ATGE_3_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
32.899.7GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
31.599.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
30.099.7GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
29.899.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
29.799.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
29.799.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
29.499.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
29.399.7GSM131556ATGE_3_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
29.199.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.599.7GSM157314Hammond_3-4_Control-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
27.699.7GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
27.499.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.999.7GSM179977Arabidopsis ein2 mutant roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
26.499.7GSM179972Arabidopsis roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
26.099.7GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.699.7GSM131555ATGE_3_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
25.399.6GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.099.6GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.899.6GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
24.799.6GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
24.799.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.299.6GSM179974Arabidopsis roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
23.399.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
23.299.6GSM179963Arabidopsis aux1 mutant roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
22.999.6GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
22.399.6GSM179971Arabidopsis roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
21.599.6GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
21.499.6GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
21.399.6GSM179973Arabidopsis roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.299.6GSM133893Schroeder_1-9_JS46-starve-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
20.099.6GSM131172AtGen_D-4_1-RL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.999.6GSM157326Hammond_3-10_Control-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
19.999.6GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
18.799.5GSM260881Yap_A2-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
18.399.5GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
17.999.5GSM131290AtGen_6-2222_Osmoticstress-Roots-1.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
17.899.5GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.799.5GSM179978Arabidopsis ein2 mutant roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
17.799.5GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
17.099.5GSM131176AtGen_D-8_1-WL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.099.5GSM131559ATGE_9_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
16.599.5GSM291118root - 21% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
16.399.5GSM133891Schroeder_1-3_JS45-control-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
16.399.5GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
16.299.5GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.299.4GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
15.299.4ArrayExpressE-MEXP-722-raw-cel-1062242948---
15.199.4GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
14.999.4GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
14.899.4GSM131558ATGE_9_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
14.599.4GSM131206AtGen_D-40_3-WL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.199.4GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.099.4GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.099.4GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
13.899.4GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
13.699.4GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
13.599.4ArrayExpressE-MEXP-722-raw-cel-1062243108---
13.599.4GSM179970Arabidopsis aux1 mutant roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
12.999.3GSM133131S1500_0H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.799.3GSM237281Root control rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
12.499.3GSM291128root - 08% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.399.3GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.299.3GSM237280Root control rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
12.099.3GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
11.899.3GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
11.799.3GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.699.3GSM260880Yap_A1-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
11.599.3GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
11.299.2GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
11.299.2GSM265464Arabidopsis, whole roots, -Fe, 3 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
11.199.2GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
11.199.2GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
11.099.2GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
11.099.2GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.999.2ArrayExpressE-MEXP-722-raw-cel-1062243048---
10.799.2GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
10.799.2GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.799.2GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.699.2GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.699.2GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.999.1GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.999.1GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.899.1GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.799.1GSM131289AtGen_6-2221_Osmoticstress-Roots-1.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.699.1GSM131173AtGen_D-5_1-BL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.699.1GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
9.599.1GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.599.1GSM131409AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.599.1GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.399.1GSM128699Heinekamp_1-8_cs-root_Rep2_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
9.299.1GSM131189AtGen_D-22_2-AL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.199.1GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.199.1GSM131204AtGen_D-38_3-AL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.099.1GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
9.099.1GSM131185AtGen_D-18_2-FL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.999.0GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.999.0GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.999.0GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.999.0ArrayExpressE-MEXP-722-raw-cel-1062243239---
8.799.0GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO



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