Specifically-expressed experiments

Gene ID	At5g05400
Gene name	disease resistance protein (CC-NBS-LRR class), putative
Functional description	F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
96.9	99.9	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
75.3	99.9	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
71.5	99.9	ArrayExpress	E-MEXP-828-raw-cel-1156922987	-	-	-
66.1	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
58.8	99.8	GSM157331	Coates_1-3_Col-3_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
52.8	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922485	-	-	-
51.6	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922794	-	-	-
50.8	99.8	GSM157335	Coates_1-7_Col-3_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
49.6	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922829	-	-	-
48.8	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922944	-	-	-
47.8	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922368	-	-	-
47.1	99.8	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.5	99.8	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
46.3	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922968	-	-	-
46.1	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922342	-	-	-
45.3	99.8	GSM157332	Coates_1-4_ara1/2mut_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
45.0	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922318	-	-	-
44.9	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922509	-	-	-
44.3	99.8	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
44.0	99.8	GSM133892	Schroeder_1-6_JS43-control-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
43.0	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922455	-	-	-
42.1	99.8	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
41.5	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922731	-	-	-
41.3	99.8	ArrayExpress	E-MEXP-828-raw-cel-1156922923	-	-	-
39.7	99.8	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
36.6	99.7	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
36.3	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922613	-	-	-
35.5	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922572	-	-	-
35.4	99.7	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
33.9	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922533	-	-	-
33.8	99.7	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
33.4	99.7	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
31.9	99.7	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
31.2	99.7	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
30.8	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922905	-	-	-
30.2	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922708	-	-	-
29.8	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
28.2	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922891	-	-	-
28.0	99.7	GSM133893	Schroeder_1-9_JS46-starve-48h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
27.7	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922750	-	-	-
27.2	99.7	GSM157339	Coates_1-11_Col-3_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
25.1	99.6	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
25.1	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922846	-	-	-
25.1	99.6	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
24.7	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922772	-	-	-
24.1	99.6	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
23.5	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922809	-	-	-
23.3	99.6	GSM133894	Schroeder_1-12_JS44-starve-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
23.2	99.6	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.0	99.6	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
22.8	99.6	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
22.0	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922595	-	-	-
21.2	99.6	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
20.0	99.6	GSM157310	Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
19.5	99.6	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.4	99.6	GSM133891	Schroeder_1-3_JS45-control-48h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
18.9	99.5	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.6	99.5	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
18.3	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922467	-	-	-
18.0	99.5	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.4	99.5	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
17.2	99.5	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.0	99.5	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
17.0	99.5	GSM179960	Arabidopsis roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.5	99.5	ArrayExpress	E-MEXP-635-raw-cel-912819840	-	-	-
16.1	99.5	GSM157337	Coates_1-9_Col-0_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
16.0	99.5	GSM157333	Coates_1-5_Col-0_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
15.7	99.5	GSM133135	S1500_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
15.3	99.4	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
15.2	99.4	GSM133766	Lindsey_1-18_torpedo-root_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
15.1	99.4	GSM179970	Arabidopsis aux1 mutant roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.5	99.4	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
14.4	99.4	GSM133126	S0_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation
14.3	99.4	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.2	99.4	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
14.2	99.4	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
13.9	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922872	-	-	-
13.7	99.4	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
13.7	99.4	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
13.4	99.4	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
13.3	99.4	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
13.1	99.4	GSM157309	Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
13.0	99.4	GSM131461	AtGen_6-9421_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
13.0	99.4	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.8	99.3	GSM179967	Arabidopsis aux1 mutant roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.7	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922386	-	-	-
12.5	99.3	GSM128703	Heinekamp_1-12_cs-root_Rep3_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
12.4	99.3	GSM75510	Col-0 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
12.3	99.3	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.2	99.3	GSM157306	Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
11.9	99.3	GSM179961	Arabidopsis roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.7	99.3	GSM75514	Col-0 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.7	99.3	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
11.7	99.3	GSM131570	ATGE_98_A	GSE5631	AtGenExpress: Developmental series (roots)
11.6	99.3	GSM179974	Arabidopsis roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.6	99.3	GSM131285	AtGen_6-2121_Osmoticstress-Roots-0.5h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
11.6	99.3	ArrayExpress	E-MEXP-635-raw-cel-912819824	-	-	-
11.4	99.3	GSM133123	S0_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.4	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922416	-	-	-
11.1	99.2	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.9	99.2	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.9	99.2	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.8	99.2	GSM131462	AtGen_6-9422_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
10.8	99.2	GSM133131	S1500_0H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.7	99.2	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.7	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922438	-	-	-
10.7	99.2	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.5	99.2	GSM128695	Heinekamp_1-4_cs-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
10.5	99.2	GSM131413	AtGen_6-8723_Woundingstress-Roots-0.25h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
10.5	99.2	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.4	99.2	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.1	99.2	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.9	99.1	GSM131571	ATGE_98_B	GSE5631	AtGenExpress: Developmental series (roots)
9.9	99.1	GSM128699	Heinekamp_1-8_cs-root_Rep2_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
9.8	99.1	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.8	99.1	GSM131249	AtGen_6-0421_Control-Roots-6.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.6	99.1	GSM131286	AtGen_6-2122_Osmoticstress-Roots-0.5h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
9.5	99.1	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM184934	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
9.3	99.1	GSM157305	Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
9.3	99.1	GSM133141	S1500_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.2	99.1	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
9.1	99.1	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.1	99.1	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.1	99.1	GSM131458	AtGen_6-9822_Heatstress(3h)+1hrecovery-Roots-4.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
9.0	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922684	-	-	-
8.9	99.0	GSM131418	AtGen_6-8126_Woundingstress-Roots-0.5h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
8.8	99.0	GSM131381	AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
8.8	99.0	GSM184544	Whole roots 2hr KNO3 treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.7	99.0	GSM176880	AWP_Control_2	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
8.7	99.0	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
8.7	99.0	GSM290827	root - 04% oxygen - 48h - B	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants

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