Specifically-expressed experiments

Gene ID	At5g04470
Gene name	SIM (SIAMESE)
Functional description	Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.6	99.7	ArrayExpress	E-MEXP-1112-raw-cel-1590665793	-	-	-
33.0	99.7	GSM131194	AtGen_D-28_2-RS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
31.3	99.7	GSM131203	AtGen_D-37_3-BL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
29.8	99.7	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
29.8	99.7	GSM131193	AtGen_D-27_2-PS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
29.4	99.7	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
29.4	99.7	ArrayExpress	E-MEXP-1112-raw-cel-1590665741	-	-	-
28.8	99.7	GSM131185	AtGen_D-18_2-FL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
28.4	99.7	GSM131170	AtGen_D-2_1-FL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
26.3	99.7	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
25.9	99.7	GSM131216	AtGen_D-26_1-FS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
25.2	99.6	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
25.1	99.6	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
25.0	99.6	GSM131182	AtGen_D-14_1-AS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.9	99.6	GSM131176	AtGen_D-8_1-WL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
24.5	99.6	GSM226546	Slice4JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.9	99.6	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
23.8	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138952	-	-	-
23.6	99.6	GSM131172	AtGen_D-4_1-RL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
23.5	99.6	GSM131206	AtGen_D-40_3-WL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
23.4	99.6	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
23.2	99.6	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
22.7	99.6	GSM131173	AtGen_D-5_1-BL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
22.6	99.6	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
22.4	99.6	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
22.2	99.6	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
22.2	99.6	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
22.1	99.6	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
22.1	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138820	-	-	-
22.0	99.6	GSM226547	Slice5JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
21.9	99.6	GSM131189	AtGen_D-22_2-AL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
21.7	99.6	GSM131187	AtGen_D-20_2-RL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
21.5	99.6	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
21.0	99.6	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
21.0	99.6	GSM67086	Arabidopsis_Stigma02	GSE3056	Arabidopsis Pollination Study
21.0	99.6	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
20.7	99.6	GSM226268	WT(Ler)_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
20.6	99.6	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
20.5	99.6	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
20.5	99.6	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
20.4	99.6	ArrayExpress	E-MEXP-1112-raw-cel-1590665689	-	-	-
20.1	99.6	GSM131196	AtGen_D-30_2-AS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
19.9	99.6	GSM134517	Col-0_4day_red illumination_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
19.8	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
19.8	99.6	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
19.3	99.6	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
19.2	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
19.2	99.6	ArrayExpress	E-MEXP-1112-raw-cel-1590665845	-	-	-
18.9	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138919	-	-	-
18.4	99.5	GSM226548	Slice6JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
18.2	99.5	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
18.1	99.5	GSM134519	Col-0_4day_red illumination_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
17.9	99.5	GSM131195	AtGen_D-29_2-BS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.9	99.5	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.8	99.5	GSM67087	Arabidopsis_Stigma03	GSE3056	Arabidopsis Pollination Study
17.4	99.5	GSM131200	AtGen_D-34_3-FL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.4	99.5	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.4	99.5	GSM131202	AtGen_D-36_3-RL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.2	99.5	GSM134518	Col-0_4day_red illumination_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
17.0	99.5	GSM134516	Col-0_4day_dark_+lincomycin_rep2	GSE5759	red illumination w/o lincomycin
16.6	99.5	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
16.6	99.5	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.5	99.5	GSM131213	AtGen_D-47_3-US_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.3	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138886	-	-	-
16.2	99.5	GSM282699	Col_BRZ_rep3	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
16.2	99.5	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
16.0	99.5	GSM292076	Wt, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
15.5	99.5	GSM282698	Col_BRZ_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
15.5	99.5	GSM134520	Col-0_4day_red illumination _+lincomycin_rep2	GSE5759	red illumination w/o lincomycin
15.3	99.4	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
15.2	99.4	GSM226271	phyAphyB_Dark_replicate2	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
15.0	99.4	GSM131198	AtGen_D-32_2-WS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.9	99.4	GSM131188	AtGen_D-21_2-BL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.8	99.4	ArrayExpress	E-MEXP-1468-raw-cel-1591139018	-	-	-
14.6	99.4	GSM226267	WT(Ler)_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
14.5	99.4	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
14.4	99.4	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.1	99.4	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
14.1	99.4	GSM226272	phyAphyB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
13.8	99.4	GSM282693	arf2_brz_1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
13.7	99.4	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
13.5	99.4	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
13.5	99.4	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
13.5	99.4	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.9	99.3	GSM282703	arf2_brz_2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
12.4	99.3	ArrayExpress	E-MEXP-1468-raw-cel-1591138985	-	-	-
12.4	99.3	GSM226270	phyAphyB_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
12.4	99.3	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
12.1	99.3	GSM266669	Arabidopsis, root cells, cortex, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.8	99.3	ArrayExpress	E-MEXP-1112-raw-cel-1590666001	-	-	-
11.7	99.3	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.6	99.3	GSM179973	Arabidopsis roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.6	99.3	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.5	99.3	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
11.4	99.3	GSM134514	Col-0_4day_dark_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
11.1	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661573074	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-1112-raw-cel-1590665273	-	-	-
11.0	99.2	GSM134515	Col-0_4day_dark_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
11.0	99.2	GSM226534	L4SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.7	99.2	ArrayExpress	E-MEXP-1112-raw-cel-1590665325	-	-	-
10.6	99.2	GSM131197	AtGen_D-31_2-US_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
10.4	99.2	GSM282697	Col_BRZ_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
10.3	99.2	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.2	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138655	-	-	-
10.1	99.2	ArrayExpress	E-MEXP-1468-raw-cel-1591138754	-	-	-
10.0	99.2	GSM292078	Wt, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
9.7	99.1	GSM282701	Col_mock_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
9.6	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836334	-	-	-
9.4	99.1	GSM260882	Yap_A1-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
9.3	99.1	GSM142643	MC002_ATH1_A7.3-dubos-wLh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.2	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836361	-	-	-
9.2	99.1	GSM142642	MC002_ATH1_A7.2-dubos-wLh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.1	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836087	-	-	-
9.1	99.1	ArrayExpress	E-NASC-78-raw-cel-1463195219	-	-	-
9.0	99.1	GSM282695	arf2_mock_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
8.9	99.0	ArrayExpress	E-MEXP-1304-raw-cel-1530618136	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-1112-raw-cel-1590666053	-	-	-
8.9	99.0	ArrayExpress	E-NASC-78-raw-cel-1463195187	-	-	-
8.8	99.0	GSM282694	arf2_mock_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
8.7	99.0	GSM245917	wild type dark replicate 2	GSE9728	COP9 signalosome (csn) mutant analysis
8.7	99.0	GSM142641	MC002_ATH1_A7.1-dubos-wLh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.7	99.0	GSM142646	MC002_ATH1_A8.3-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis

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