Specifically-expressed experiments

Gene ID	At5g04310
Gene name	pectate lyase family protein
Functional description	F:pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
907.5	100.0	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
755.7	100.0	GSM184905	Arabidopsis, root cells, protophloem, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
752.8	100.0	GSM184906	Arabidopsis, root cells, protophloem, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
688.7	100.0	GSM184904	Arabidopsis, root cells, protophloem, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
117.3	99.9	GSM184922	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
62.8	99.8	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
59.5	99.8	GSM226550	Slice8JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
54.5	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.4	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
42.8	99.8	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
40.5	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.7	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
38.4	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.1	99.8	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
37.3	99.7	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
35.9	99.7	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
33.2	99.7	GSM226549	Slice7JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
32.9	99.7	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
31.8	99.7	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
30.9	99.7	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
30.6	99.7	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
29.8	99.7	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
29.7	99.7	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.5	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.3	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.0	99.7	ArrayExpress	E-MEXP-1094-raw-cel-1379507513	-	-	-
26.9	99.7	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
26.8	99.7	ArrayExpress	E-MEXP-1094-raw-cel-1379507553	-	-	-
25.8	99.7	ArrayExpress	E-MEXP-1094-raw-cel-1379507233	-	-	-
24.5	99.6	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
23.6	99.6	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
22.0	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
20.2	99.6	GSM133964	Fukuda_1-9_8A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
19.6	99.6	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.2	99.5	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
17.9	99.5	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.6	99.5	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
17.6	99.5	ArrayExpress	E-MEXP-1094-raw-cel-1379507193	-	-	-
16.9	99.5	GSM226548	Slice6JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
16.7	99.5	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.5	99.5	ArrayExpress	E-MEXP-1094-raw-cel-1379507433	-	-	-
14.6	99.4	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.3	99.4	ArrayExpress	E-MEXP-1094-raw-cel-1379507473	-	-	-
14.2	99.4	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
14.0	99.4	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.3	99.4	GSM133962	Fukuda_1-7_6A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
13.2	99.4	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.0	99.4	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.4	99.3	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.2	99.3	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
11.6	99.3	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
11.2	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173273005	-	-	-
10.8	99.2	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.5	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173272977	-	-	-
9.0	99.1	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
8.8	99.0	ArrayExpress	E-ATMX-28-raw-cel-1441104853	-	-	-

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