Specifically-expressed experiments

Gene ID At5g04040
Gene name SDP1 (SUGAR-DEPENDENT1)
Functional description Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
112.299.9GSM133759Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
61.999.8ArrayExpressE-TABM-63-raw-cel-681137195---
40.499.8GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
38.299.8GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
33.899.7ArrayExpressE-TABM-63-raw-cel-681137124---
27.399.7GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
22.299.6GSM133402Knight_2-4_sfr6-dk_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
21.299.6ArrayExpressE-TABM-63-raw-cel-681137052---
21.199.6ArrayExpressE-TABM-63-raw-cel-681137015---
20.499.6GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
17.399.5GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.399.5ArrayExpressE-MEXP-1299-raw-cel-1519902871---
15.599.5GSM2531584h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
14.399.4GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
14.099.4GSM311285Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
14.099.4GSM226274YHB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
13.599.4ArrayExpressCapper_1-10_E6_water---
13.599.4ArrayExpressCapper_1-9_E6_estradiol---
13.599.4GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
12.999.3GSM226275YHB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
12.999.3ArrayExpressE-MEXP-1299-raw-cel-1519902780---
12.799.3GSM2531606h into an extended nightGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
12.699.3GSM7718004h low CO2 + dark replicate BGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expressionLink to GEO
11.899.3ArrayExpressCapper_1-7_D9_estradiol---
11.499.3GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.099.2GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
10.799.2GSM226273YHB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
10.699.2GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.399.2ArrayExpressCapper_1-8_D9_water---
10.399.2GSM2531618h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
10.199.2GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.999.1GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.999.1ArrayExpressE-MEXP-849-raw-cel-1181981046---
9.899.1ArrayExpressCapper_1-1_A3_estradiol---
9.899.1ArrayExpressE-MEXP-1299-raw-cel-1519902498---
9.799.1GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.799.1ArrayExpressE-MEXP-1094-raw-cel-1379507433---
9.699.1GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.699.1ArrayExpressCapper_1-4_B8_water---
9.599.1ArrayExpressE-MEXP-1094-raw-cel-1379507473---
9.499.1GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
9.399.1GSM158703WT-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
9.399.1ArrayExpressE-MEXP-849-raw-cel-1181981006---
9.199.1GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.099.1ArrayExpressCapper_1-3_B8_estradiol---
9.099.1GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.099.1GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.999.0GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
8.799.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.799.0GSM2531594h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
8.799.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.799.0ArrayExpressCapper_1-11_E10_estradiol---



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