Specifically-expressed experiments

Gene ID At5g02780
Gene name In2-1 protein, putative
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOFA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
358.6100.0GSM270866Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
327.5100.0GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
310.1100.0GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
308.7100.0GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
297.2100.0GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
289.7100.0GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
161.099.9GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
140.399.9GSM265470Arabidopsis, whole roots, -Fe, 24 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
118.599.9GSM75519slr-1 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
118.599.9GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
106.699.9GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
94.699.9GSM265469Arabidopsis, whole roots, -Fe, 24 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
65.299.8GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
64.399.8GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
55.199.8ArrayExpressE-MEXP-635-raw-cel-912819840---
50.899.8GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
49.999.8GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
48.699.8ArrayExpressE-MEXP-635-raw-cel-912819824---
44.299.8ArrayExpressE-MEXP-546-raw-cel-863289424---
36.899.7ArrayExpressE-MEXP-546-raw-cel-863289532---
30.299.7GSM184927Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
28.799.7GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
28.299.7GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
27.899.7GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
26.399.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
26.099.7GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
25.299.6GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
25.199.6GSM270814Arabidopsis cell culture, 4 h_control_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
24.699.6GSM265467Arabidopsis, whole roots, -Fe, 12 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
24.599.6ArrayExpressE-ATMX-25-raw-cel-1441077482---
23.999.6GSM184930Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
22.999.6GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
22.099.6GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
21.899.6GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
21.699.6GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
21.699.6GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
20.299.6GSM133302NO.27GSE5699AtGenExpress: ARR21C overexpressionLink to GEO
20.299.6GSM184928Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
20.199.6GSM157336Coates_1-8_ara1/2mut_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
18.699.5GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
18.399.5GSM133300NO.25GSE5699AtGenExpress: ARR21C overexpressionLink to GEO
18.299.5GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
17.299.5GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
17.299.5GSM265468Arabidopsis, whole roots, -Fe, 12 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
17.299.5ArrayExpressE-ATMX-25-raw-cel-1441077500---
16.999.5GSM133301NO.26GSE5699AtGenExpress: ARR21C overexpressionLink to GEO
15.599.5GSM184929Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
15.099.4GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.699.4ArrayExpressE-MEXP-546-raw-cel-863289476---
13.099.4GSM157339Coates_1-11_Col-3_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
12.799.3ArrayExpressE-MEXP-711-raw-cel-1563002839---
12.699.3GSM184925Arabidopsis, whole roots, standard conditions, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
12.199.3ArrayExpressE-ATMX-25-raw-cel-1441077517---
12.199.3ArrayExpressE-MEXP-711-raw-cel-1563002768---
12.099.3ArrayExpressE-MEXP-1784-raw-cel-1661573018---
11.999.3GSM157335Coates_1-7_Col-3_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
11.899.3ArrayExpressE-MEXP-711-raw-cel-1563002902---
11.799.3GSM157331Coates_1-3_Col-3_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
11.799.3GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
11.499.3GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
11.199.2ArrayExpressE-MEXP-739-raw-cel-1099467339---
11.099.2GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
10.699.2GSM131126AtGen_B-12_1-5-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.699.2GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.699.2GSM157337Coates_1-9_Col-0_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.699.2ArrayExpressE-ATMX-31-raw-cel-1516947984---
10.599.2ArrayExpressE-MEXP-807-raw-cel-1173272948---
10.499.2GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.499.2ArrayExpressE-ATMX-31-raw-cel-1516948018---
10.199.2ArrayExpressE-MEXP-807-raw-cel-1173273032---
10.199.2ArrayExpressE-MEXP-711-raw-cel-1563002803---
10.099.2ArrayExpressE-MEXP-739-raw-cel-1099467321---
9.999.1ArrayExpressE-MEXP-1784-raw-cel-1661572992---
9.599.1GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
9.099.1GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
8.999.0GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.899.0GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
8.699.0GSM131385AtGen_6-7721_UV-Bstress-Roots-0.25h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO



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