Specifically-expressed experiments

Gene ID At5g02580
Gene name unknown protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
211.4100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
86.399.9GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
83.999.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
75.199.9GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
62.299.8GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
52.799.8GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
52.199.8GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
48.299.8GSM134303Penfield_1-5_endosperm-ABA_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
45.499.8GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
44.899.8GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
43.099.8GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
42.799.8GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
42.399.8GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
40.899.8GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
40.299.8GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
37.899.8ArrayExpressE-MEXP-1468-raw-cel-1591138919---
37.299.7GSM133958Fukuda_1-3_2A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
37.099.7GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
36.799.7GSM106912opr3_JA 8hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
36.499.7GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
36.299.7GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
36.199.7GSM245918wild type dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
36.099.7GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
35.599.7ArrayExpressE-MEXP-1784-raw-cel-1661572930---
35.099.7GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
34.999.7ArrayExpressE-MEXP-1784-raw-cel-1661572909---
34.699.7GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
34.299.7GSM134304Penfield_1-6_endosperm-ABA_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
33.899.7GSM245917wild type dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
33.499.7ArrayExpressE-MEXP-1784-raw-cel-1661572888---
33.199.7GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
32.599.7GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thalianaLink to GEO
32.199.7ArrayExpressE-MEXP-1468-raw-cel-1591138820---
31.399.7GSM173623Col-0 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
29.799.7ArrayExpressE-MEXP-1784-raw-cel-1661573074---
29.199.7GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
29.099.7GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
28.199.7GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
27.899.7GSM62699arf6/arf6 ARF8/arf8 flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
27.599.7GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
27.099.7ArrayExpressE-MEXP-1784-raw-cel-1661573138---
26.699.7GSM173446oxt6 mutant, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thalianaLink to GEO
26.699.7ArrayExpressE-MEXP-1784-raw-cel-1661573032---
26.699.7GSM226271phyAphyB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
26.599.7GSM245916wild type dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
25.999.7GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
24.499.6GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
23.799.6GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
23.499.6ArrayExpressE-MEXP-1784-raw-cel-1661573096---
23.499.6GSM106917opr3_JA_22 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
21.999.6GSM133317RIKEN-LI4AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
21.699.6GSM134313Penfield_1-15_embryo-ABA_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
21.699.6GSM134513Col-0_4day_dark_-lincomycin_rep1GSE5759red illumination w/o lincomycinLink to GEO
21.699.6GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.599.6ArrayExpressE-MEXP-1784-raw-cel-1661573117---
21.399.6GSM226267WT(Ler)_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
21.299.6GSM134312Penfield_1-14_embryo-ABA_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
20.899.6GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
20.099.6GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
19.499.6GSM133319RIKEN-LI5AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
19.399.6GSM134302Penfield_1-4_endosperm-ABA_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
19.299.6GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
18.999.5GSM173649mARF10 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
18.499.5GSM131590ATGE_35_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
18.299.5GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.099.5GSM106915opr3_JA_22 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
17.699.5ArrayExpressE-MEXP-1468-raw-cel-1591138655---
17.199.5GSM106973ws_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
16.899.5ArrayExpressE-MEXP-1468-raw-cel-1591138787---
16.499.5GSM133322RIKEN-LI6BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
16.399.5GSM134315Penfield_1-17_embryo-PAC_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
16.399.5ArrayExpressE-MEXP-1468-raw-cel-1591138952---
15.999.5GSM25316548h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
15.899.5GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
15.699.5GSM299410pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
15.699.5GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
15.699.5GSM173628ARF10 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
15.599.5ArrayExpressE-MEXP-1468-raw-cel-1591138853---
15.399.4GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
15.299.4GSM106914opr3_JA_8 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
15.299.4ArrayExpressE-MEXP-1299-raw-cel-1519902871---
15.199.4GSM134311Penfield_1-13_embryo-ABA_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
14.299.4GSM134309Penfield_1-11_embryo-control_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
14.199.4GSM133820Yang_1-5_young-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
14.099.4GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
13.999.4ArrayExpressE-MEXP-1304-raw-cel-1530618171---
13.899.4GSM299408pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.899.4GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
13.799.4GSM299340pkl Mutant Germinating Seeds With Uniconazole Treatment Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.699.4ArrayExpressE-MEXP-1468-raw-cel-1591138886---
13.499.4ArrayExpressE-NASC-78-raw-cel-1463195187---
13.299.4GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
12.999.3GSM226546Slice4JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.799.3GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
12.699.3ArrayExpressE-MEXP-1607-raw-cel-1620685818---
12.699.3ArrayExpressE-TABM-52-raw-cel-1583682926---
12.499.3GSM131593ATGE_36_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
12.499.3ArrayExpressE-NASC-78-raw-cel-1463195219---
12.499.3GSM299341pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
12.499.3GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.399.3ArrayExpressE-MEXP-1299-raw-cel-1519902780---
12.299.3GSM134310Penfield_1-12_embryo-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
11.999.3GSM131591ATGE_36_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
11.899.3GSM173648mARF10 rep1GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
11.799.3GSM142826PJ002_ATH1_A7-jarvis-B1798GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
11.699.3GSM173624Col-0 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
11.599.3ArrayExpressE-MEXP-1468-raw-cel-1591138688---
11.499.3ArrayExpressE-MEXP-1607-raw-cel-1620685834---
11.199.2ArrayExpressE-NASC-78-raw-cel-1463195235---
11.099.2GSM299339pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.099.2GSM173651mARF10 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
11.099.2ArrayExpressE-NASC-78-raw-cel-1463195283---
11.099.2GSM25316648h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
10.799.2GSM10484lec1-1 Post-Mature Green Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
10.799.2ArrayExpressE-TABM-52-raw-cel-1583683182---
10.799.2GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.799.2GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
10.699.2GSM299409pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.599.2GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
10.599.2GSM173445oxt6 mutant, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thalianaLink to GEO
10.499.2GSM133313RIKEN-LI2AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
10.499.2ArrayExpressE-MEXP-1304-raw-cel-1530617971---
10.399.2ArrayExpressE-MEXP-1607-raw-cel-1620685826---
10.399.2GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
10.299.2GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.099.2GSM133321RIKEN-LI6AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
10.099.2ArrayExpressE-MEXP-1784-raw-cel-1661573053---
9.899.1GSM299330pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.899.1GSM10483lec1-1 Post-Mature Green Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
9.799.1GSM47036hen1 26GSE2473Small RNA biogenesis mutantsLink to GEO
9.799.1GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.799.1GSM260955A2-LLOYD-PHO_REP2GSE10326Transcriptome analysis of pho3Link to GEO
9.799.1GSM131592ATGE_36_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.699.1GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.599.1GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
9.599.1GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.599.1GSM62695Columbia flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
9.599.1GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.499.1GSM131598ATGE_39_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.499.1GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.399.1GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.399.1GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.399.1GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
9.299.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.299.1GSM106916opr3_JA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
9.199.1GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
9.199.1GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
9.099.1GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
9.099.1GSM173626ARF10 rep1GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
8.999.0GSM173629ARF10 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
8.999.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.899.0GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
8.799.0GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO



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