Specifically-expressed experiments

Gene ID At5g02540
Gene name short-chain dehydrogenase/reductase (SDR) family protein
Functional description F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
253.0100.0ArrayExpressE-MEXP-1443-raw-cel-1581869515---
103.999.9ArrayExpressE-MEXP-1299-raw-cel-1519903848---
96.599.9GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
82.599.9ArrayExpressE-MEXP-1299-raw-cel-1519902871---
76.799.9GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
75.699.9GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
70.799.9ArrayExpressE-MEXP-1299-raw-cel-1519902994---
69.499.9GSM10479lec1-1 Cotyledon Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
68.699.9GSM40552Total RNA, non-stressedGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
66.899.8GSM10480lec1-1 Cotyledon Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
66.599.8ArrayExpressE-MEXP-1443-raw-cel-1581869573---
66.499.8ArrayExpressE-MEXP-1299-raw-cel-1519902780---
53.399.8GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
47.399.8ArrayExpressE-MEXP-1299-raw-cel-1519902698---
43.099.8ArrayExpressE-MEXP-1299-raw-cel-1519903415---
40.599.8ArrayExpressE-NASC-78-raw-cel-1463195219---
39.999.8ArrayExpressRente_1-3_WS2-Control_Rep1_ATH1---
39.599.8ArrayExpressE-NASC-78-raw-cel-1463195267---
39.199.8ArrayExpressE-MEXP-1592-raw-cel-1617526856---
37.599.7GSM10448WT Cotyledon Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
34.299.7GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
33.699.7GSM133820Yang_1-5_young-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
32.799.7ArrayExpressE-MEXP-444-raw-cel-670291665---
31.399.7GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
30.199.7ArrayExpressE-MEXP-1299-raw-cel-1519902498---
29.099.7ArrayExpressE-NASC-78-raw-cel-1463195187---
28.999.7ArrayExpressE-MEXP-1592-raw-cel-1617526888---
27.799.7GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
26.299.7ArrayExpressE-MEXP-1592-raw-cel-1617526984---
25.499.6ArrayExpressRente_1-4_KKO-Control_Rep1_ATH1---
24.299.6GSM311283Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
23.599.6GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
23.599.6ArrayExpressE-NASC-78-raw-cel-1463195235---
23.599.6ArrayExpressE-MEXP-444-raw-cel-670291861---
22.899.6GSM10478lec1-1 24-Hr Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
22.899.6GSM157377Truman_1-5_Pst-DC3000(hrpA)-4hpi_Rep2_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
22.799.6GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
22.599.6ArrayExpressE-MEXP-809-raw-cel-1123684141---
22.499.6GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
21.399.6ArrayExpressE-MEXP-1299-raw-cel-1519903338---
21.299.6GSM10449WT Cotyledon Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
21.299.6GSM311284Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
20.999.6GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
20.699.6ArrayExpressE-MEXP-1592-raw-cel-1617526816---
20.399.6GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
19.699.6ArrayExpressE-MEXP-444-raw-cel-670291713---
19.699.6ArrayExpressE-MEXP-1592-raw-cel-1617526952---
19.399.6GSM40554Polysomal mRNA, non-stressGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
19.299.6GSM134771abi4-102_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
18.999.5GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
18.799.5GSM134782gun1-1_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
18.299.5ArrayExpressE-ATMX-3-raw-cel-1161357790---
17.599.5ArrayExpressE-NASC-78-raw-cel-1463195251---
17.499.5ArrayExpressE-MEXP-1608-raw-cel-1620686957---
17.199.5ArrayExpressE-MEXP-1592-raw-cel-1617526848---
16.999.5ArrayExpressE-MEXP-1592-raw-cel-1617526824---
16.899.5ArrayExpressE-MEXP-809-raw-cel-1123684158---
16.799.5ArrayExpressE-MEXP-1592-raw-cel-1617526920---
16.499.5ArrayExpressE-MEXP-1592-raw-cel-1617526912---
16.299.5ArrayExpressE-ATMX-3-raw-cel-1161357611---
16.199.5ArrayExpressE-MEXP-285-raw-cel-440783152---
15.599.5GSM157376Truman_1-4_Pst-DC3000-4hpi_Rep2_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
15.599.5ArrayExpressE-MEXP-432-raw-cel-590864447---
15.499.5ArrayExpressE-NASC-78-raw-cel-1463195283---
15.199.4GSM142823PJ002_ATH1_A4-jarvis-iae2GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
14.999.4ArrayExpressE-MEXP-1608-raw-cel-1620687021---
14.699.4GSM131578ATGE_31_C2GSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.599.4GSM142820PJ002_ATH1_A1-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
14.199.4GSM134769abi4-102_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
13.699.4GSM157378Truman_1-6_Pst-DC3000(avrRpm1)-4hpi_Rep2_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
13.499.4ArrayExpressE-MEXP-285-raw-cel-440783213---
13.299.4GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
13.099.4ArrayExpressE-MEXP-432-raw-cel-590864460---
12.899.3ArrayExpressE-ATMX-3-raw-cel-1161357446---
12.899.3ArrayExpressE-MEXP-1608-raw-cel-1620686965---
12.699.3GSM131576ATGE_31_A2GSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
12.299.3ArrayExpressE-ATMX-3-raw-cel-1161357954---
12.299.3GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.199.3GSM142822PJ002_ATH1_A3-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
12.099.3GSM131577ATGE_31_B2GSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
11.999.3ArrayExpressE-ATMX-3-raw-cel-1161357528---
11.799.3ArrayExpressE-MEXP-1299-raw-cel-1519902420---
11.599.3GSM142821PJ002_ATH1_A2-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
11.399.3ArrayExpressE-MEXP-1304-raw-cel-1530620221---
11.399.3GSM142824PJ002_ATH1_A5-jarvis-iae2GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
11.199.2ArrayExpressE-MEXP-1451-raw-cel-1585200202---
11.099.2ArrayExpressE-ATMX-33-raw-cel-1562596081---
11.099.2GSM319208Dark-grown WT control (vector#1) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
10.799.2ArrayExpressE-MEXP-849-raw-cel-1181980894---
10.799.2GSM67080Arabidopsis_Ovary03GSE3056Arabidopsis Pollination StudyLink to GEO
10.799.2ArrayExpressE-MEXP-1451-raw-cel-1585200170---
10.699.2GSM134768abi4-102_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
10.699.2GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
10.699.2GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
10.599.2ArrayExpressE-MEXP-1299-raw-cel-1519901917---
10.599.2GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.399.2ArrayExpressE-MEXP-809-raw-cel-1123684124---
10.299.2ArrayExpressE-MEXP-1299-raw-cel-1519901992---
10.299.2GSM67078Arabidopsis_Ovary01GSE3056Arabidopsis Pollination StudyLink to GEO
9.599.1GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.499.1GSM142825PJ002_ATH1_A6-jarvis-iae2GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
9.399.1GSM311285Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
9.299.1ArrayExpressE-MEXP-1451-raw-cel-1585200234---
9.199.1ArrayExpressE-MEXP-1468-raw-cel-1591138853---
9.199.1ArrayExpressE-MEXP-1299-raw-cel-1519901564---
8.999.0GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.999.0GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
8.899.0ArrayExpressE-ATMX-31-raw-cel-1516947967---
8.699.0GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO



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