Specifically-expressed experiments

Gene ID	At4g39890
Gene name	AtRABH1c (Arabidopsis Rab GTPase homolog H1c)
Functional description	F:protein binding, GTP binding;P:protein transport, small GTPase mediated signal transduction;C:endomembrane system;MOFPBVA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
315.7	100.0	ArrayExpress	E-MEXP-509-raw-cel-829148703	-	-	-
129.4	99.9	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
105.3	99.9	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
75.1	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
70.0	99.9	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
60.0	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
54.0	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
49.6	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
49.4	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
45.6	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
43.7	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
38.5	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
29.0	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
26.4	99.7	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
26.2	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.1	99.7	GSM142835	MG001_ATH1_A13-Torres-4N1	GSE6176	Impact of Type III effectors on plant defense responses
25.3	99.6	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
24.2	99.6	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.0	99.6	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
22.5	99.6	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
22.3	99.6	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
22.3	99.6	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
22.3	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
22.1	99.6	ArrayExpress	E-MEXP-98-raw-cel-320188749	-	-	-
21.6	99.6	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.4	99.6	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.0	99.6	ArrayExpress	E-MEXP-98-raw-cel-320188694	-	-	-
20.9	99.6	ArrayExpress	E-NASC-76-raw-cel-1359879028	-	-	-
20.8	99.6	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
20.8	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
20.7	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
20.6	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
20.4	99.6	GSM133809	Diamond_A-2-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
20.2	99.6	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
19.7	99.6	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.6	99.6	ArrayExpress	E-NASC-76-raw-cel-1359878951	-	-	-
19.6	99.6	GSM48127	Col_CSC3	GSE2538	Chitin Oligomer Experiment
19.3	99.6	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
19.0	99.5	GSM133812	Diamond_A-1-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
18.8	99.5	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.3	99.5	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.3	99.5	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
18.2	99.5	GSM133813	Diamond_A-2-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
17.2	99.5	ArrayExpress	E-NASC-76-raw-cel-1359879132	-	-	-
17.1	99.5	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.0	99.5	GSM131148	AtGen_B-34_3-6-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
16.9	99.5	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
16.4	99.5	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
16.4	99.5	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
16.3	99.5	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.1	99.5	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
15.4	99.5	GSM142851	MG001_ATH1_A4-Torres-2N1	GSE6176	Impact of Type III effectors on plant defense responses
15.1	99.4	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
15.1	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
14.9	99.4	GSM264765	paraquat 20mM 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
14.8	99.4	GSM142833	MG001_ATH1_A10-Torres-5N1	GSE6176	Impact of Type III effectors on plant defense responses
14.7	99.4	GSM133815	Diamond_A-4-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
14.4	99.4	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.4	99.4	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
13.7	99.4	GSM142854	MG001_ATH1_A7-Torres-3N1	GSE6176	Impact of Type III effectors on plant defense responses
13.6	99.4	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.5	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467285	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148666	-	-	-
13.1	99.4	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
13.0	99.4	ArrayExpress	E-MEXP-547-raw-cel-863346403	-	-	-
12.8	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
12.5	99.3	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
12.5	99.3	GSM133808	Diamond_A-1-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
12.5	99.3	GSM133811	Diamond_A-4-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
12.3	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148420	-	-	-
12.3	99.3	ArrayExpress	E-NASC-76-raw-cel-1359879106	-	-	-
12.2	99.3	GSM133814	Diamond_A-3-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
12.1	99.3	GSM48122	Col_8mer1	GSE2538	Chitin Oligomer Experiment
11.6	99.3	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
11.6	99.3	GSM131146	AtGen_B-32_3-4-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.4	99.3	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
11.4	99.3	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
11.3	99.3	GSM142649	MC002_ATH1_A9.3-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.3	99.3	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
11.3	99.3	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
11.0	99.2	ArrayExpress	E-MEXP-509-raw-cel-829148385	-	-	-
11.0	99.2	GSM142840	MG001_ATH1_A1-Torres-1N1	GSE6176	Impact of Type III effectors on plant defense responses
10.9	99.2	GSM142648	MC002_ATH1_A9.2-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.8	99.2	GSM142647	MC002_ATH1_A9.1-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.6	99.2	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
10.5	99.2	ArrayExpress	E-MEXP-547-raw-cel-863346376	-	-	-
10.5	99.2	GSM133810	Diamond_A-3-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
10.5	99.2	ArrayExpress	E-MEXP-98-raw-cel-320188969	-	-	-
10.3	99.2	GSM131119	AtGen_B-5_1-5-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.2	99.2	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.1	99.2	GSM133037	2508	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.0	99.2	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
9.9	99.1	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.5	99.1	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.3	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-509-raw-cel-829148842	-	-	-
9.3	99.1	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
9.1	99.1	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.1	99.1	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
9.1	99.1	GSM133045	2787	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
9.0	99.1	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
9.0	99.1	GSM48125	Col_CSC1	GSE2538	Chitin Oligomer Experiment
9.0	99.1	GSM131134	AtGen_B-20_2-6-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.9	99.0	GSM131120	AtGen_B-6_1-6-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.8	99.0	GSM131132	AtGen_B-18_2-4-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.8	99.0	GSM133064	2528	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.7	99.0	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.7	99.0	GSM131147	AtGen_B-33_3-5-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.7	99.0	GSM133048	2790	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.7	99.0	ArrayExpress	E-NASC-76-raw-cel-1359879184	-	-	-
8.7	99.0	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints

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