Specifically-expressed experiments

Gene ID At4g38690
Gene name 1-phosphatidylinositol phosphodiesterase-related
Functional description F:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, N-terminal protein myristoylation, lipid metabolic process;C:cellular_component unknown;BFMPO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.599.7ArrayExpressE-MEXP-1304-raw-cel-1530619734---
28.399.7GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
27.599.7GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
27.599.7ArrayExpressE-MEXP-1299-raw-cel-1519903848---
26.299.7GSM131204AtGen_D-38_3-AL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
24.899.6GSM131172AtGen_D-4_1-RL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
24.599.6GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
23.299.6ArrayExpressE-MEXP-1299-raw-cel-1519903415---
22.799.6GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
21.799.6GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.699.6GSM226273YHB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
21.199.6ArrayExpressE-MEXP-1304-raw-cel-1530618549---
20.699.6GSM131176AtGen_D-8_1-WL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.499.6ArrayExpressE-MEXP-1304-raw-cel-1530619770---
20.399.6GSM131189AtGen_D-22_2-AL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.299.6GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.299.6GSM131206AtGen_D-40_3-WL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.199.6GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.199.6GSM226277WT(Ler)_Rc15_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
19.599.6GSM226276WT(Ler)_Rc15_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
19.499.6GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.599.5ArrayExpressE-MEXP-1608-raw-cel-1620687013---
17.399.5GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.199.5GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
16.099.5GSM226279WT(Ler)_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
15.999.5GSM131205AtGen_D-39_3-UL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.999.5GSM226274YHB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
15.899.5GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.799.5ArrayExpressE-MEXP-1304-raw-cel-1530619805---
15.799.5ArrayExpressE-MEXP-838-raw-cel-1160703964---
15.699.5GSM131173AtGen_D-5_1-BL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.599.5GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
14.999.4ArrayExpressE-MEXP-1304-raw-cel-1530618308---
14.899.4GSM131188AtGen_D-21_2-BL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.799.4ArrayExpressE-MEXP-1304-raw-cel-1530618371---
14.699.4ArrayExpressE-MEXP-1304-raw-cel-1530618649---
14.599.4GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.499.4ArrayExpressE-MEXP-715-raw-cel-1121836221---
14.499.4ArrayExpressE-MEXP-715-raw-cel-1121836196---
14.499.4GSM226275YHB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
14.399.4ArrayExpressE-MEXP-1304-raw-cel-1530618795---
14.099.4GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.799.4GSM131200AtGen_D-34_3-FL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.599.4ArrayExpressE-MEXP-1608-raw-cel-1620686981---
13.499.4GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.299.4ArrayExpressE-MEXP-1304-raw-cel-1530618583---
13.299.4GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.199.4GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.199.4ArrayExpressE-MEXP-1304-raw-cel-1530618986---
13.099.4ArrayExpressE-MEXP-1304-raw-cel-1530619835---
12.999.3ArrayExpressE-MEXP-1304-raw-cel-1530619020---
12.999.3ArrayExpressE-MEXP-1304-raw-cel-1530618339---
12.899.3GSM131194AtGen_D-28_2-RS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.899.3GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
12.699.3GSM131213AtGen_D-47_3-US_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.699.3GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.599.3GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.499.3ArrayExpressE-MEXP-1094-raw-cel-1379507353---
12.499.3ArrayExpressE-MEXP-715-raw-cel-1121836153---
12.499.3GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.399.3GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.399.3GSM226280YHB_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
12.199.3GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.199.3ArrayExpressE-MEXP-715-raw-cel-1121835915---
12.099.3GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.099.3GSM131181AtGen_D-13_1-BS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.999.3GSM131185AtGen_D-18_2-FL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.999.3GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
11.799.3ArrayExpressE-MEXP-1299-raw-cel-1519902087---
11.799.3GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.799.3GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.799.3GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.699.3GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.699.3GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.699.3GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
11.699.3ArrayExpressE-MEXP-1608-raw-cel-1620687005---
11.599.3ArrayExpressE-MEXP-715-raw-cel-1121836247---
11.599.3ArrayExpressE-MEXP-1304-raw-cel-1530619577---
11.599.3GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.599.3GSM67112Arabidopsis_Seedling04GSE3056Arabidopsis Pollination StudyLink to GEO
11.499.3GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
11.499.3ArrayExpressRente_1-3_WS2-Control_Rep1_ATH1---
11.299.2ArrayExpressE-MEXP-1299-raw-cel-1519903746---
11.299.2GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
11.199.2GSM159299Col_dark_late_rep3GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
11.199.2ArrayExpressE-MEXP-838-raw-cel-1160703933---
11.199.2ArrayExpressE-MEXP-715-raw-cel-1121836030---
11.199.2GSM109121vte1-1(Col-0) 3 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
11.199.2GSM131489ATGE_100_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
11.099.2GSM131183AtGen_D-15_1-US_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.099.2GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.999.2ArrayExpressE-MEXP-838-raw-cel-1160703895---
10.999.2GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.899.2GSM131198AtGen_D-32_2-WS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.799.2GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.799.2ArrayExpressE-MEXP-1608-raw-cel-1620686989---
10.699.2GSM282700Col_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.499.2ArrayExpressE-MEXP-715-raw-cel-1121836301---
10.299.2GSM226278WT(Ler)_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
10.299.2ArrayExpressE-MEXP-838-raw-cel-1160704054---
10.299.2GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
10.199.2GSM131197AtGen_D-31_2-US_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.199.2GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.099.2GSM247623Col-0-Wc-rep1GSE9816Gene expression profiling of sav mutantsLink to GEO
9.999.1ArrayExpressE-MEXP-1304-raw-cel-1530619702---
9.899.1GSM133865Beynon_1-8-cat-ReferenceMix_Rep1_ATH1GSE5739Comparison of CATMA, Affymetrix and Agilent arraysLink to GEO
9.699.1ArrayExpressE-ATMX-31-raw-cel-1516947933---
9.699.1ArrayExpressE-MEXP-1299-raw-cel-1519903670---
9.699.1GSM128749De Veylder_1-1_wildtype_Rep1_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
9.599.1GSM133861Beynon_1-4-cat-SpikeMix4_Rep1_ATH1GSE5739Comparison of CATMA, Affymetrix and Agilent arraysLink to GEO
9.399.1GSM131218Scrase-Field_1-2_camta1-2-Col-0_Rep1_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
9.399.1ArrayExpressE-MEXP-1608-raw-cel-1620686957---
9.399.1GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.199.1ArrayExpressE-MEXP-1443-raw-cel-1581869515---
9.199.1GSM317526Apex_5DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
9.199.1GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.099.1ArrayExpressE-ATMX-31-raw-cel-1516947967---
9.099.1GSM142691MH001_ATH1_A5-grevi-AC2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
9.099.1ArrayExpressCornah_1-11_A3-msx_Rep3_ATH1---
9.099.1GSM131220Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
9.099.1GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
8.999.0ArrayExpressE-MEXP-1304-raw-cel-1530619546---
8.999.0ArrayExpressE-MEXP-1304-raw-cel-1530618827---
8.999.0GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.899.0ArrayExpressE-MEXP-1299-raw-cel-1519903589---
8.899.0GSM311270ged1 seedlings, biological rep2GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
8.899.0ArrayExpressE-MEXP-1299-raw-cel-1519903496---
8.799.0ArrayExpressE-MEXP-1299-raw-cel-1519902871---
8.699.0GSM133402Knight_2-4_sfr6-dk_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
8.699.0GSM131195AtGen_D-29_2-BS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO



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