Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
30.5 | 99.7 | ArrayExpress | E-MEXP-1304-raw-cel-1530619734 | - | - | - |
28.3 | 99.7 | GSM131187 | AtGen_D-20_2-RL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
27.5 | 99.7 | GSM131202 | AtGen_D-36_3-RL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
27.5 | 99.7 | ArrayExpress | E-MEXP-1299-raw-cel-1519903848 | - | - | - |
26.2 | 99.7 | GSM131204 | AtGen_D-38_3-AL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
24.8 | 99.6 | GSM131172 | AtGen_D-4_1-RL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
24.5 | 99.6 | GSM292081 | pif1-2, dark sample, biological rep3 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
23.2 | 99.6 | ArrayExpress | E-MEXP-1299-raw-cel-1519903415 | - | - | - |
22.7 | 99.6 | GSM292079 | pif1-2, dark sample, biological rep1 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
21.7 | 99.6 | GSM131186 | AtGen_D-19_2-PL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
21.6 | 99.6 | GSM226273 | YHB_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
21.1 | 99.6 | ArrayExpress | E-MEXP-1304-raw-cel-1530618549 | - | - | - |
20.6 | 99.6 | GSM131176 | AtGen_D-8_1-WL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.4 | 99.6 | ArrayExpress | E-MEXP-1304-raw-cel-1530619770 | - | - | - |
20.3 | 99.6 | GSM131189 | AtGen_D-22_2-AL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.2 | 99.6 | GSM131171 | AtGen_D-3_1-PL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.2 | 99.6 | GSM131206 | AtGen_D-40_3-WL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.1 | 99.6 | GSM131191 | AtGen_D-24_2-WL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.1 | 99.6 | GSM226277 | WT(Ler)_Rc15_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
19.5 | 99.6 | GSM226276 | WT(Ler)_Rc15_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
19.4 | 99.6 | GSM131174 | AtGen_D-6_1-AL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
17.5 | 99.5 | ArrayExpress | E-MEXP-1608-raw-cel-1620687013 | - | - | - |
17.3 | 99.5 | GSM131203 | AtGen_D-37_3-BL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
16.1 | 99.5 | GSM133400 | Knight_2-3_sfr6-lt_Rep1_ATH1 | GSE5710 | Dark-induced gene expression in sfr6 |  |
16.0 | 99.5 | GSM226279 | WT(Ler)_Rc50_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
15.9 | 99.5 | GSM131205 | AtGen_D-39_3-UL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
15.9 | 99.5 | GSM226274 | YHB_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
15.8 | 99.5 | GSM131216 | AtGen_D-26_1-FS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
15.7 | 99.5 | ArrayExpress | E-MEXP-1304-raw-cel-1530619805 | - | - | - |
15.7 | 99.5 | ArrayExpress | E-MEXP-838-raw-cel-1160703964 | - | - | - |
15.6 | 99.5 | GSM131173 | AtGen_D-5_1-BL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
15.5 | 99.5 | GSM292080 | pif1-2, dark sample, biological rep2 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
14.9 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618308 | - | - | - |
14.8 | 99.4 | GSM131188 | AtGen_D-21_2-BL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
14.7 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618371 | - | - | - |
14.6 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618649 | - | - | - |
14.5 | 99.4 | GSM131210 | AtGen_D-44_3-RS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
14.4 | 99.4 | ArrayExpress | E-MEXP-715-raw-cel-1121836221 | - | - | - |
14.4 | 99.4 | ArrayExpress | E-MEXP-715-raw-cel-1121836196 | - | - | - |
14.4 | 99.4 | GSM226275 | YHB_Dark_replicate3 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
14.3 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618795 | - | - | - |
14.0 | 99.4 | GSM131215 | AtGen_D-17_2-DL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
13.7 | 99.4 | GSM131200 | AtGen_D-34_3-FL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
13.5 | 99.4 | ArrayExpress | E-MEXP-1608-raw-cel-1620686981 | - | - | - |
13.4 | 99.4 | GSM131184 | AtGen_D-16_1-WS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
13.2 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618583 | - | - | - |
13.2 | 99.4 | GSM131170 | AtGen_D-2_1-FL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
13.1 | 99.4 | GSM131214 | AtGen_D-48_3-WS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
13.1 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618986 | - | - | - |
13.0 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530619835 | - | - | - |
12.9 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530619020 | - | - | - |
12.9 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530618339 | - | - | - |
12.8 | 99.3 | GSM131194 | AtGen_D-28_2-RS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.8 | 99.3 | GSM292078 | Wt, dark sample, biological rep3 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
12.6 | 99.3 | GSM131213 | AtGen_D-47_3-US_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.6 | 99.3 | GSM131178 | AtGen_D-10_1-FS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.5 | 99.3 | GSM131211 | AtGen_D-45_3-BS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.4 | 99.3 | ArrayExpress | E-MEXP-1094-raw-cel-1379507353 | - | - | - |
12.4 | 99.3 | ArrayExpress | E-MEXP-715-raw-cel-1121836153 | - | - | - |
12.4 | 99.3 | GSM131190 | AtGen_D-23_2-UL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.3 | 99.3 | GSM131175 | AtGen_D-7_1-UL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.3 | 99.3 | GSM226280 | YHB_Rc50_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
12.1 | 99.3 | GSM131207 | AtGen_D-41_3-DS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.1 | 99.3 | ArrayExpress | E-MEXP-715-raw-cel-1121835915 | - | - | - |
12.0 | 99.3 | GSM131196 | AtGen_D-30_2-AS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
12.0 | 99.3 | GSM131181 | AtGen_D-13_1-BS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.9 | 99.3 | GSM131185 | AtGen_D-18_2-FL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.9 | 99.3 | GSM292076 | Wt, dark sample, biological rep1 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
11.7 | 99.3 | ArrayExpress | E-MEXP-1299-raw-cel-1519902087 | - | - | - |
11.7 | 99.3 | GSM131209 | AtGen_D-43_3-PS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.7 | 99.3 | GSM131212 | AtGen_D-46_3-AS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.7 | 99.3 | GSM131199 | AtGen_D-33_3-DL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.6 | 99.3 | GSM131180 | AtGen_D-12_1-RS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.6 | 99.3 | GSM131177 | AtGen_D-9_1-DS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.6 | 99.3 | GSM292077 | Wt, dark sample, biological rep2 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
11.6 | 99.3 | ArrayExpress | E-MEXP-1608-raw-cel-1620687005 | - | - | - |
11.5 | 99.3 | ArrayExpress | E-MEXP-715-raw-cel-1121836247 | - | - | - |
11.5 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530619577 | - | - | - |
11.5 | 99.3 | GSM131208 | AtGen_D-42_3-FS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.5 | 99.3 | GSM67112 | Arabidopsis_Seedling04 | GSE3056 | Arabidopsis Pollination Study |  |
11.4 | 99.3 | GSM226270 | phyAphyB_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
11.4 | 99.3 | ArrayExpress | Rente_1-3_WS2-Control_Rep1_ATH1 | - | - | - |
11.2 | 99.2 | ArrayExpress | E-MEXP-1299-raw-cel-1519903746 | - | - | - |
11.2 | 99.2 | GSM282693 | arf2_brz_1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
11.1 | 99.2 | GSM159299 | Col_dark_late_rep3 | GSE6906 | Rhythmic growth explained by coincidence between internal and external cues |  |
11.1 | 99.2 | ArrayExpress | E-MEXP-838-raw-cel-1160703933 | - | - | - |
11.1 | 99.2 | ArrayExpress | E-MEXP-715-raw-cel-1121836030 | - | - | - |
11.1 | 99.2 | GSM109121 | vte1-1(Col-0) 3 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis |  |
11.1 | 99.2 | GSM131489 | ATGE_100_A | GSE5629 | AtGenExpress: Developmental series (seedlings and whole plants) |  |
11.0 | 99.2 | GSM131183 | AtGen_D-15_1-US_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
11.0 | 99.2 | GSM131193 | AtGen_D-27_2-PS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
10.9 | 99.2 | ArrayExpress | E-MEXP-838-raw-cel-1160703895 | - | - | - |
10.9 | 99.2 | GSM282703 | arf2_brz_2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
10.8 | 99.2 | GSM131198 | AtGen_D-32_2-WS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
10.7 | 99.2 | GSM131169 | AtGen_D-1_1-DL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
10.7 | 99.2 | ArrayExpress | E-MEXP-1608-raw-cel-1620686989 | - | - | - |
10.6 | 99.2 | GSM282700 | Col_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
10.4 | 99.2 | ArrayExpress | E-MEXP-715-raw-cel-1121836301 | - | - | - |
10.2 | 99.2 | GSM226278 | WT(Ler)_Rc50_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
10.2 | 99.2 | ArrayExpress | E-MEXP-838-raw-cel-1160704054 | - | - | - |
10.2 | 99.2 | GSM134514 | Col-0_4day_dark_-lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin |  |
10.1 | 99.2 | GSM131197 | AtGen_D-31_2-US_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
10.1 | 99.2 | GSM131179 | AtGen_D-11_1-PS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
10.0 | 99.2 | GSM247623 | Col-0-Wc-rep1 | GSE9816 | Gene expression profiling of sav mutants |  |
9.9 | 99.1 | ArrayExpress | E-MEXP-1304-raw-cel-1530619702 | - | - | - |
9.8 | 99.1 | GSM133865 | Beynon_1-8-cat-ReferenceMix_Rep1_ATH1 | GSE5739 | Comparison of CATMA, Affymetrix and Agilent arrays |  |
9.6 | 99.1 | ArrayExpress | E-ATMX-31-raw-cel-1516947933 | - | - | - |
9.6 | 99.1 | ArrayExpress | E-MEXP-1299-raw-cel-1519903670 | - | - | - |
9.6 | 99.1 | GSM128749 | De Veylder_1-1_wildtype_Rep1_ATH1 | GSE5529 | Arabidopsis E2F target genes |  |
9.5 | 99.1 | GSM133861 | Beynon_1-4-cat-SpikeMix4_Rep1_ATH1 | GSE5739 | Comparison of CATMA, Affymetrix and Agilent arrays |  |
9.3 | 99.1 | GSM131218 | Scrase-Field_1-2_camta1-2-Col-0_Rep1_ATH1 | GSE5618 | Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA |  |
9.3 | 99.1 | ArrayExpress | E-MEXP-1608-raw-cel-1620686957 | - | - | - |
9.3 | 99.1 | GSM226269 | WT(Ler)_Dark_replicate3 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
9.1 | 99.1 | ArrayExpress | E-MEXP-1443-raw-cel-1581869515 | - | - | - |
9.1 | 99.1 | GSM317526 | Apex_5DAS_2 | GSE12676 | Arabidopsis thaliana Ler developmental series |  |
9.1 | 99.1 | GSM131192 | AtGen_D-25_2-DS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
9.0 | 99.1 | ArrayExpress | E-ATMX-31-raw-cel-1516947967 | - | - | - |
9.0 | 99.1 | GSM142691 | MH001_ATH1_A5-grevi-AC2 | GSE6158 | Investigating the links between organic acid and carbohydrate regulation of gene expression. |  |
9.0 | 99.1 | ArrayExpress | Cornah_1-11_A3-msx_Rep3_ATH1 | - | - | - |
9.0 | 99.1 | GSM131220 | Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1 | GSE5618 | Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA |  |
9.0 | 99.1 | GSM282701 | Col_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
8.9 | 99.0 | ArrayExpress | E-MEXP-1304-raw-cel-1530619546 | - | - | - |
8.9 | 99.0 | ArrayExpress | E-MEXP-1304-raw-cel-1530618827 | - | - | - |
8.9 | 99.0 | GSM131182 | AtGen_D-14_1-AS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
8.8 | 99.0 | ArrayExpress | E-MEXP-1299-raw-cel-1519903589 | - | - | - |
8.8 | 99.0 | GSM311270 | ged1 seedlings, biological rep2 | GSE12401 | Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant |  |
8.8 | 99.0 | ArrayExpress | E-MEXP-1299-raw-cel-1519903496 | - | - | - |
8.7 | 99.0 | ArrayExpress | E-MEXP-1299-raw-cel-1519902871 | - | - | - |
8.6 | 99.0 | GSM133402 | Knight_2-4_sfr6-dk_Rep1_ATH1 | GSE5710 | Dark-induced gene expression in sfr6 |  |
8.6 | 99.0 | GSM131195 | AtGen_D-29_2-BS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |