Specifically-expressed experiments

Gene ID At4g38080
Gene name hydroxyproline-rich glycoprotein family protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
102.299.9ArrayExpressE-MEXP-828-raw-cel-1156922905---
93.799.9ArrayExpressE-MEXP-828-raw-cel-1156922809---
89.499.9ArrayExpressE-MEXP-828-raw-cel-1156922944---
87.899.9ArrayExpressE-MEXP-828-raw-cel-1156922872---
81.399.9ArrayExpressE-MEXP-828-raw-cel-1156922829---
78.099.9ArrayExpressE-MEXP-828-raw-cel-1156922968---
72.499.9GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
68.099.9ArrayExpressE-MEXP-828-raw-cel-1156922846---
63.799.8ArrayExpressE-MEXP-828-raw-cel-1156922634---
61.899.8ArrayExpressE-MEXP-828-raw-cel-1156922923---
60.599.8ArrayExpressE-MEXP-828-raw-cel-1156922684---
55.099.8ArrayExpressE-MEXP-828-raw-cel-1156922659---
47.499.8GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
47.399.8ArrayExpressE-MEXP-828-raw-cel-1156922416---
45.799.8ArrayExpressE-MEXP-828-raw-cel-1156922891---
43.099.8ArrayExpressE-MEXP-828-raw-cel-1156922467---
41.299.8ArrayExpressE-MEXP-828-raw-cel-1156922987---
39.499.8ArrayExpressE-ATMX-1-raw-cel-1112746154---
37.499.7ArrayExpressE-MEXP-722-raw-cel-1062243239---
35.499.7GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
35.099.7ArrayExpressE-MEXP-722-raw-cel-1062243183---
33.999.7ArrayExpressE-MEXP-828-raw-cel-1156922386---
33.299.7ArrayExpressE-MEXP-828-raw-cel-1156922438---
31.599.7ArrayExpressE-MEXP-828-raw-cel-1156922772---
30.799.7ArrayExpressE-MEXP-828-raw-cel-1156922485---
30.599.7GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
29.999.7ArrayExpressE-MEXP-828-raw-cel-1156922553---
29.999.7ArrayExpressE-MEXP-828-raw-cel-1156922731---
29.899.7GSM218593Whole roots 3.5hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.799.7GSM184561Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.599.7ArrayExpressE-MEXP-828-raw-cel-1156922533---
28.299.7ArrayExpressE-ATMX-1-raw-cel-1112746095---
27.199.7GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
26.299.7ArrayExpressE-MEXP-828-raw-cel-1156922794---
26.199.7ArrayExpressE-ATMX-1-raw-cel-1112746209---
25.699.7ArrayExpressE-MEXP-722-raw-cel-1062243429---
25.399.6ArrayExpressE-MEXP-828-raw-cel-1156922708---
25.299.6ArrayExpressE-MEXP-722-raw-cel-1062243048---
24.999.6ArrayExpressE-MEXP-828-raw-cel-1156922296---
24.699.6ArrayExpressE-MEXP-722-raw-cel-1062242948---
24.499.6GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
24.399.6ArrayExpressE-MEXP-828-raw-cel-1156922342---
24.399.6GSM260881Yap_A2-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
23.899.6ArrayExpressE-MEXP-722-raw-cel-1062243108---
23.799.6ArrayExpressE-MEXP-828-raw-cel-1156922750---
23.599.6ArrayExpressE-MEXP-828-raw-cel-1156922318---
23.499.6GSM75518slr-1 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
22.799.6ArrayExpressE-MEXP-828-raw-cel-1156922509---
22.399.6GSM184560Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.099.6GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
20.999.6GSM260880Yap_A1-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
20.599.6GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
19.599.6GSM218592Whole roots 3.5hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.799.5ArrayExpressE-MEXP-828-raw-cel-1156922455---
18.699.5GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
18.199.5ArrayExpressE-MEXP-828-raw-cel-1156922368---
17.999.5GSM75508Col-0 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
17.399.5GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
17.099.5GSM265464Arabidopsis, whole roots, -Fe, 3 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
16.899.5GSM218596Whole roots 3.5hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.699.5GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
16.299.5GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
16.199.5ArrayExpressE-MEXP-722-raw-cel-1062242857---
15.999.5GSM184544Whole roots 2hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.599.5GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
15.599.5GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
15.499.5GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
15.399.4GSM133121S0_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
15.199.4GSM133133S1500_12H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.899.4GSM133129S0_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
14.899.4GSM265462Arabidopsis, whole roots, standard conditions, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
14.899.4GSM131566ATGE_94_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
14.699.4GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.499.4GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.299.4GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.299.4GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
14.199.4GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
14.199.4ArrayExpressE-MEXP-828-raw-cel-1156922595---
14.099.4GSM237282Root Selenate rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
13.899.4GSM133127S0_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
13.799.4ArrayExpressE-MEXP-722-raw-cel-1062243390---
13.799.4GSM265469Arabidopsis, whole roots, -Fe, 24 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
13.699.4GSM133123S0_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
13.699.4ArrayExpressE-MEXP-722-raw-cel-1062243314---
13.699.4GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
13.599.4GSM265470Arabidopsis, whole roots, -Fe, 24 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
13.599.4GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
13.499.4ArrayExpressE-MEXP-637-raw-cel-913038938---
13.499.4GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.399.4GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.199.4ArrayExpressE-MEXP-722-raw-cel-1062243559---
13.199.4GSM133142S1500_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.999.3GSM133130S0_8H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.999.3GSM133134S1500_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.899.3GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
12.799.3GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.799.3GSM142721CH001_ATH1_A001-Hampt-wsaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
12.699.3GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
12.599.3GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
12.499.3GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
12.499.3GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
12.299.3GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.199.3GSM265468Arabidopsis, whole roots, -Fe, 12 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.199.3GSM133131S1500_0H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.099.3GSM133135S1500_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.099.3GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
12.099.3GSM157307Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
12.099.3GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
11.999.3GSM157324Hammond_3-17_Potassium-starved-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
11.899.3GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.799.3GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.799.3GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.599.3ArrayExpressE-MEXP-828-raw-cel-1156922572---
11.399.3GSM237280Root control rep 1GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
11.199.2GSM157337Coates_1-9_Col-0_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
11.199.2GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
11.199.2GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
11.199.2GSM131565ATGE_94_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.099.2GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
10.999.2GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
10.899.2GSM133122S0_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.899.2GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.799.2GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.799.2GSM157325Hammond_3-18_Caesium-treated-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
10.799.2GSM133717Urwin_A-1-Urwin-Con_SLDGSE5724Plant gene expression associated with susceptibility to nematodesLink to GEO
10.599.2GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
10.399.2GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
10.399.2ArrayExpressE-MEXP-791-raw-cel-1122937578---
10.399.2GSM131571ATGE_98_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.299.2ArrayExpressE-MEXP-791-raw-cel-1122937623---
10.299.2GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
10.299.2GSM142727CH001_ATH1_A006-Hampt-akbGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.199.2GSM265463Arabidopsis, whole roots, -Fe, 3 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
10.199.2GSM157305Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
10.199.2GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.099.2GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.099.2GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
10.099.2GSM237281Root control rep 2GSE9311Gene expression in roots and shoots of plants grown on selenateLink to GEO
10.099.2GSM184553Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.099.2GSM75510Col-0 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.999.1GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.899.1GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.899.1GSM142726CH001_ATH1_A005-Hampt-wsb_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
9.699.1GSM31920535S-MIF1 line #124, dark grown, replicate1GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
9.699.1GSM157335Coates_1-7_Col-3_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.499.1GSM133125S0_2H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.499.1GSM142671SF001_ATH1_A1-Fille-WT-nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
9.499.1GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.499.1GSM291023root - 08% oxygen - 30min - GGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.399.1GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.399.1GSM142672SF001_ATH1_A2-Fille-WT-+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
9.299.1GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.199.1GSM133141S1500_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.199.1GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.099.1GSM131564ATGE_94_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.099.1GSM133128S0_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
9.099.1ArrayExpressE-MEXP-637-raw-cel-913039196---
8.999.0GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.999.0GSM265466Arabidopsis, whole roots, -Fe, 6 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
8.999.0GSM184543Whole roots 2hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM157328Hammond_3-12_Caesium-treated-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
8.899.0GSM291101root - 21% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
8.799.0GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO



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