Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
240.7 | 100.0 | ArrayExpress | E-MEXP-1112-raw-cel-1590665325 | - | - | - |
171.8 | 100.0 | ArrayExpress | E-MEXP-1112-raw-cel-1590665377 | - | - | - |
152.0 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665793 | - | - | - |
148.1 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665273 | - | - | - |
140.1 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665741 | - | - | - |
139.8 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665689 | - | - | - |
115.0 | 99.9 | GSM282700 | Col_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
111.1 | 99.9 | GSM282694 | arf2_mock_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
108.4 | 99.9 | GSM282695 | arf2_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
106.2 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665429 | - | - | - |
88.4 | 99.9 | GSM226267 | WT(Ler)_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
84.8 | 99.9 | ArrayExpress | E-MEXP-1112-raw-cel-1590665845 | - | - | - |
78.7 | 99.9 | GSM282701 | Col_mock_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
74.8 | 99.9 | GSM142773 | AM002_ATH1_A8-MCCOR-GDB | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
73.0 | 99.9 | GSM282702 | Col_mock_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
72.9 | 99.9 | GSM226268 | WT(Ler)_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
72.6 | 99.9 | GSM282696 | arf2_mock_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
71.2 | 99.9 | GSM142779 | AM002_ATH1_A4-MCCOR-GDA | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
71.0 | 99.9 | GSM226270 | phyAphyB_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
66.5 | 99.8 | GSM226272 | phyAphyB_Dark_replicate3 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
64.5 | 99.8 | GSM226271 | phyAphyB_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
61.8 | 99.8 | GSM131199 | AtGen_D-33_3-DL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
59.6 | 99.8 | GSM131169 | AtGen_D-1_1-DL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
56.8 | 99.8 | GSM131191 | AtGen_D-24_2-WL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
54.1 | 99.8 | GSM292076 | Wt, dark sample, biological rep1 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
54.1 | 99.8 | GSM131186 | AtGen_D-19_2-PL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
54.0 | 99.8 | GSM131171 | AtGen_D-3_1-PL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
53.0 | 99.8 | GSM131187 | AtGen_D-20_2-RL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
52.1 | 99.8 | GSM131202 | AtGen_D-36_3-RL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
50.9 | 99.8 | GSM131214 | AtGen_D-48_3-WS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
50.4 | 99.8 | GSM142774 | AM002_ATH1_A9-MCCOR-AFA | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
49.9 | 99.8 | GSM131215 | AtGen_D-17_2-DL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
49.4 | 99.8 | GSM292079 | pif1-2, dark sample, biological rep1 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
48.5 | 99.8 | GSM131196 | AtGen_D-30_2-AS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
48.4 | 99.8 | GSM131176 | AtGen_D-8_1-WL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
46.4 | 99.8 | GSM131193 | AtGen_D-27_2-PS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
43.9 | 99.8 | GSM319209 | Dark-grown WT control (vector#4) | GSE12729 | Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings |  |
43.4 | 99.8 | GSM131179 | AtGen_D-11_1-PS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
43.4 | 99.8 | GSM131172 | AtGen_D-4_1-RL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
43.2 | 99.8 | GSM131170 | AtGen_D-2_1-FL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
42.6 | 99.8 | GSM131198 | AtGen_D-32_2-WS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
41.9 | 99.8 | GSM131189 | AtGen_D-22_2-AL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
41.9 | 99.8 | GSM131192 | AtGen_D-25_2-DS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
40.9 | 99.8 | GSM131180 | AtGen_D-12_1-RS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
40.4 | 99.8 | GSM131194 | AtGen_D-28_2-RS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
40.3 | 99.8 | GSM131185 | AtGen_D-18_2-FL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
40.3 | 99.8 | GSM282699 | Col_BRZ_rep3 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
40.3 | 99.8 | GSM131181 | AtGen_D-13_1-BS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
40.3 | 99.8 | GSM131173 | AtGen_D-5_1-BL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
39.8 | 99.8 | GSM131208 | AtGen_D-42_3-FS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
39.3 | 99.8 | GSM131216 | AtGen_D-26_1-FS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
38.6 | 99.8 | GSM131206 | AtGen_D-40_3-WL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
38.4 | 99.8 | GSM131184 | AtGen_D-16_1-WS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
38.2 | 99.8 | GSM131210 | AtGen_D-44_3-RS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
38.0 | 99.8 | GSM131175 | AtGen_D-7_1-UL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
37.3 | 99.7 | GSM131178 | AtGen_D-10_1-FS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
37.0 | 99.7 | GSM131188 | AtGen_D-21_2-BL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
36.9 | 99.7 | GSM131209 | AtGen_D-43_3-PS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
36.7 | 99.7 | GSM131203 | AtGen_D-37_3-BL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
36.6 | 99.7 | GSM131182 | AtGen_D-14_1-AS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
35.9 | 99.7 | GSM131207 | AtGen_D-41_3-DS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
35.6 | 99.7 | ArrayExpress | E-MEXP-1299-raw-cel-1519902871 | - | - | - |
35.5 | 99.7 | GSM131200 | AtGen_D-34_3-FL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
35.3 | 99.7 | GSM142772 | AM002_ATH1_A7-MCCOR-GFB | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
35.3 | 99.7 | GSM131195 | AtGen_D-29_2-BS_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
35.0 | 99.7 | GSM131197 | AtGen_D-31_2-US_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
33.9 | 99.7 | GSM142778 | AM002_ATH1_A3-MCCOR-GFA | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
33.4 | 99.7 | ArrayExpress | E-MEXP-1299-raw-cel-1519902498 | - | - | - |
32.8 | 99.7 | GSM131177 | AtGen_D-9_1-DS_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
32.4 | 99.7 | GSM282698 | Col_BRZ_rep2 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
31.9 | 99.7 | GSM131211 | AtGen_D-45_3-BS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
31.5 | 99.7 | GSM131174 | AtGen_D-6_1-AL_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
30.9 | 99.7 | GSM131204 | AtGen_D-38_3-AL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
30.7 | 99.7 | GSM142781 | AM002_ATH1_A6-MCCOR-WDB | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
30.7 | 99.7 | GSM142775 | AM002_ATH1_A10-MCCOR-ADA | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
30.3 | 99.7 | GSM131212 | AtGen_D-46_3-AS_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
30.0 | 99.7 | GSM131183 | AtGen_D-15_1-US_REP1_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
29.1 | 99.7 | GSM282697 | Col_BRZ_rep1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
26.6 | 99.7 | GSM131205 | AtGen_D-39_3-UL_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
23.6 | 99.6 | GSM131213 | AtGen_D-47_3-US_REP3_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
22.2 | 99.6 | ArrayExpress | E-MEXP-1468-raw-cel-1591138952 | - | - | - |
21.3 | 99.6 | GSM131190 | AtGen_D-23_2-UL_REP2_ATH1 | GSE5617 | AtGenExpress: Light treatments |  |
20.3 | 99.6 | GSM226269 | WT(Ler)_Dark_replicate3 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
19.9 | 99.6 | GSM142777 | AM002_ATH1_A2-MCCOR-WDA | GSE6169 | Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development. |  |
16.6 | 99.5 | GSM292081 | pif1-2, dark sample, biological rep3 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
15.7 | 99.5 | GSM282693 | arf2_brz_1 | GSE11216 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |  |
15.4 | 99.5 | ArrayExpress | E-MEXP-475-raw-cel-680982485 | - | - | - |
13.7 | 99.4 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root |  |
13.0 | 99.4 | GSM292080 | pif1-2, dark sample, biological rep2 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
12.7 | 99.3 | GSM319210 | Dark-grown WT control (vector#7) | GSE12729 | Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings |  |
12.4 | 99.3 | GSM226280 | YHB_Rc50_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
11.8 | 99.3 | ArrayExpress | E-NASC-78-raw-cel-1463195171 | - | - | - |
11.3 | 99.3 | ArrayExpress | E-MEXP-1299-raw-cel-1519903415 | - | - | - |
11.0 | 99.2 | ArrayExpress | Rente_1-4_KKO-Control_Rep1_ATH1 | - | - | - |
10.8 | 99.2 | ArrayExpress | E-MEXP-1468-raw-cel-1591138919 | - | - | - |
9.5 | 99.1 | GSM226273 | YHB_Dark_replicate1 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |
9.5 | 99.1 | ArrayExpress | E-MEXP-1299-raw-cel-1519902780 | - | - | - |
9.3 | 99.1 | ArrayExpress | E-MEXP-475-raw-cel-680982521 | - | - | - |
9.3 | 99.1 | GSM292077 | Wt, dark sample, biological rep2 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
8.8 | 99.0 | GSM292078 | Wt, dark sample, biological rep3 | GSE11594 | Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |  |
8.6 | 99.0 | GSM226274 | YHB_Dark_replicate2 | GSE8951 | A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks |  |