| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 173.8 | 100.0 | GSM134304 | Penfield_1-6_endosperm-ABA_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
| 170.2 | 100.0 | GSM134301 | Penfield_1-3_endosperm-control_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 132.8 | 99.9 | GSM134300 | Penfield_1-2_endosperm-control_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 129.7 | 99.9 | GSM109112 | vte1-1(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 128.7 | 99.9 | GSM134299 | Penfield_1-1_endosperm-control_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 112.7 | 99.9 | GSM134306 | Penfield_1-8_endosperm-PAC_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 110.9 | 99.9 | GSM134307 | Penfield_1-9_endosperm-PAC_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 96.0 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685818 | - | - | - |
| 92.3 | 99.9 | GSM109109 | wild-type(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 90.3 | 99.9 | GSM134305 | Penfield_1-7_endosperm-PAC_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 85.4 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685834 | - | - | - |
| 84.1 | 99.9 | GSM134303 | Penfield_1-5_endosperm-ABA_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 82.2 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685826 | - | - | - |
| 82.1 | 99.9 | GSM109115 | vte2-1(Col-0) 1 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 77.5 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685810 | - | - | - |
| 71.1 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685802 | - | - | - |
| 70.7 | 99.9 | ArrayExpress | E-MEXP-1607-raw-cel-1620685786 | - | - | - |
| 67.1 | 99.8 | ArrayExpress | E-MEXP-1607-raw-cel-1620685770 | - | - | - |
| 66.1 | 99.8 | ArrayExpress | E-MEXP-1607-raw-cel-1620685794 | - | - | - |
| 60.1 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981046 | - | - | - |
| 60.0 | 99.8 | GSM134302 | Penfield_1-4_endosperm-ABA_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 53.2 | 99.8 | GSM299337 | Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 52.7 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981022 | - | - | - |
| 52.5 | 99.8 | ArrayExpress | E-MEXP-1607-raw-cel-1620685778 | - | - | - |
| 52.2 | 99.8 | GSM299338 | Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 52.0 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981038 | - | - | - |
| 51.8 | 99.8 | GSM299326 | Wild Type Germinating Seeds With Solvent Treatment Only Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 51.2 | 99.8 | GSM299339 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 51.1 | 99.8 | GSM299331 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 49.7 | 99.8 | GSM299325 | Wild Type Germinating Seeds With Solvent Treatment Only Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 49.2 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981006 | - | - | - |
| 48.2 | 99.8 | GSM299324 | Wild Type Germinating Seeds With Solvent Treatment Only Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 48.2 | 99.8 | GSM299323 | Wild Type Germinating Seeds With Solvent Treatment Only Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 48.0 | 99.8 | GSM299330 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 47.8 | 99.8 | GSM299333 | Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 47.5 | 99.8 | GSM299329 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 46.6 | 99.8 | GSM299321 | Wild Type Germinating Seeds With Solvent Treatment Only Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 44.7 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981030 | - | - | - |
| 44.5 | 99.8 | GSM133321 | RIKEN-LI6A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 44.2 | 99.8 | ArrayExpress | E-MEXP-849-raw-cel-1181981014 | - | - | - |
| 43.8 | 99.8 | GSM299327 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 43.1 | 99.8 | GSM299408 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 42.4 | 99.8 | GSM133320 | RIKEN-LI5B | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 41.1 | 99.8 | GSM299332 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 40.6 | 99.8 | GSM299336 | Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 38.9 | 99.8 | GSM299322 | Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 38.9 | 99.8 | GSM133119 | RIKEN-YAMAUCHI2A | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 37.4 | 99.7 | GSM109113 | vte2-1(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 36.9 | 99.7 | GSM133120 | RIKEN-YAMAUCHI2B | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 36.3 | 99.7 | GSM173623 | Col-0 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 35.9 | 99.7 | GSM299341 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 35.8 | 99.7 | GSM109107 | wild-type(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 35.5 | 99.7 | GSM299410 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 35.4 | 99.7 | GSM299335 | Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 34.3 | 99.7 | GSM133322 | RIKEN-LI6B | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 34.2 | 99.7 | GSM133319 | RIKEN-LI5A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 33.2 | 99.7 | GSM109108 | wild-type(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 32.8 | 99.7 | GSM109110 | vte1-1(Col-0) 1 day, biological rep1 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 32.5 | 99.7 | GSM299340 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 32.1 | 99.7 | GSM133317 | RIKEN-LI4A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 31.5 | 99.7 | GSM299409 | pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 31.0 | 99.7 | GSM109111 | vte1-1(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 29.8 | 99.7 | GSM299334 | Wild Type Germinating Seeds With Uniconazole Treatment Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 29.7 | 99.7 | GSM173649 | mARF10 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 28.5 | 99.7 | GSM173628 | ARF10 rep2 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 28.5 | 99.7 | GSM173626 | ARF10 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 28.4 | 99.7 | GSM299328 | pkl Mutant Germinating Seeds With Solvent Treatment Only Set 2 of 6 | GSE11852 | Effect of uniconazole on wt and pkl mutant germinating seeds | |
| 28.0 | 99.7 | GSM173648 | mARF10 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 27.4 | 99.7 | GSM173624 | Col-0 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 27.3 | 99.7 | GSM173621 | Col-0 rep1 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 26.5 | 99.7 | ArrayExpress | Cornah_1-10_A2-irv_Rep3_ATH1 | - | - | - |
| 25.7 | 99.7 | GSM173651 | mARF10 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 23.7 | 99.6 | GSM173629 | ARF10 rep3 | GSE7227 | microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds | |
| 23.4 | 99.6 | GSM131847 | Pracharoenwattana_1-4_ColA_Rep1_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 23.3 | 99.6 | GSM109114 | vte2-1(Col-0) 1 day, biological rep2 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 22.8 | 99.6 | GSM131845 | Pracharoenwattana_1-2_mdhB_Rep2_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 21.4 | 99.6 | GSM133305 | RIKEN-NAKABAYASHI2A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 19.9 | 99.6 | ArrayExpress | E-MEXP-1310-raw-cel-1534419293 | - | - | - |
| 18.5 | 99.5 | ArrayExpress | E-MEXP-1310-raw-cel-1534419208 | - | - | - |
| 18.1 | 99.5 | GSM134309 | Penfield_1-11_embryo-control_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 18.0 | 99.5 | GSM131846 | Pracharoenwattana_1-3_mdhC_Rep3_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 17.4 | 99.5 | ArrayExpress | E-MEXP-1310-raw-cel-1534419166 | - | - | - |
| 16.9 | 99.5 | ArrayExpress | E-MEXP-1310-raw-cel-1534419084 | - | - | - |
| 16.9 | 99.5 | GSM131844 | Pracharoenwattana_1-1_mdhA_Rep1_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 16.3 | 99.5 | GSM134308 | Penfield_1-10_embryo-control_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 15.4 | 99.5 | ArrayExpress | E-MEXP-1310-raw-cel-1534419254 | - | - | - |
| 15.3 | 99.4 | GSM133118 | RIKEN-YAMAUCHI1B | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 15.1 | 99.4 | GSM134310 | Penfield_1-12_embryo-control_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 14.8 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530618104 | - | - | - |
| 14.5 | 99.4 | GSM134514 | Col-0_4day_dark_-lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin | |
| 14.2 | 99.4 | ArrayExpress | E-MEXP-1468-raw-cel-1591138655 | - | - | - |
| 13.9 | 99.4 | ArrayExpress | E-MEXP-1468-raw-cel-1591138688 | - | - | - |
| 13.1 | 99.4 | ArrayExpress | E-MEXP-1304-raw-cel-1530617900 | - | - | - |
| 12.7 | 99.3 | GSM131848 | Pracharoenwattana_1-5_ColB_Rep2_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 12.6 | 99.3 | GSM142695 | MH001_ATH1_A9-grevi-CT3 | GSE6158 | Investigating the links between organic acid and carbohydrate regulation of gene expression. | |
| 12.5 | 99.3 | GSM131849 | Pracharoenwattana_1-6_ColC_Rep3_ATH1 | GSE5641 | Peroxisomal mdh mutant | |
| 12.4 | 99.3 | ArrayExpress | Cornah_1-15_msc_Rep3_ATH1 | - | - | - |
| 12.1 | 99.3 | ArrayExpress | Cornah_1-12_A4-wsx_Rep3_ATH1 | - | - | - |
| 12.1 | 99.3 | ArrayExpress | Cornah_1-14_msc_Rep2_ATH1 | - | - | - |
| 11.9 | 99.3 | ArrayExpress | E-MEXP-1304-raw-cel-1530617935 | - | - | - |
| 11.1 | 99.2 | ArrayExpress | E-MEXP-1310-raw-cel-1534419123 | - | - | - |
| 10.6 | 99.2 | ArrayExpress | E-MEXP-1784-raw-cel-1661573138 | - | - | - |
| 10.6 | 99.2 | GSM133310 | RIKEN-NAKABAYASHI5B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 10.6 | 99.2 | GSM142689 | MH001_ATH1_A3-grevi-CC3 | GSE6158 | Investigating the links between organic acid and carbohydrate regulation of gene expression. | |
| 10.5 | 99.2 | ArrayExpress | E-MEXP-1304-raw-cel-1530618068 | - | - | - |
| 10.4 | 99.2 | GSM134518 | Col-0_4day_red illumination_-lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin | |
| 10.2 | 99.2 | GSM134515 | Col-0_4day_dark_+lincomycin_rep1 | GSE5759 | red illumination w/o lincomycin | |
| 10.2 | 99.2 | GSM133307 | RIKEN-NAKABAYASHI3A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 10.1 | 99.2 | ArrayExpress | E-MEXP-1304-raw-cel-1530618003 | - | - | - |
| 10.0 | 99.2 | GSM134520 | Col-0_4day_red illumination _+lincomycin_rep2 | GSE5759 | red illumination w/o lincomycin | |
| 9.7 | 99.1 | GSM109124 | vte2-1(Col-0) 3 day, biological rep3 | GSE4847 | Expression data from tocopherol deficient seedlings of Arabidopsis | |
| 9.5 | 99.1 | ArrayExpress | E-MEXP-1304-raw-cel-1530617971 | - | - | - |
| 8.9 | 99.0 | ArrayExpress | E-MEXP-1304-raw-cel-1530618171 | - | - | - |
