Specifically-expressed experiments

Gene ID At4g34030
Gene name MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)
Functional description MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
65.499.8ArrayExpressE-MEXP-1299-raw-cel-1519902498---
53.899.8ArrayExpressE-MEXP-1299-raw-cel-1519902871---
43.899.8GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
37.599.7GSM226280YHB_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
36.999.7GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
35.999.7ArrayExpressRente_1-4_KKO-Control_Rep1_ATH1---
35.699.7GSM25316548h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
32.999.7GSM67112Arabidopsis_Seedling04GSE3056Arabidopsis Pollination StudyLink to GEO
32.899.7ArrayExpressE-MEXP-1299-raw-cel-1519902780---
29.799.7ArrayExpressRente_1-3_WS2-Control_Rep1_ATH1---
27.299.7ArrayExpressE-MEXP-1112-raw-cel-1590665325---
24.699.6GSM25316648h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
22.899.6ArrayExpressE-MEXP-475-raw-cel-680982467---
22.599.6ArrayExpressE-MEXP-513-raw-cel-829814446---
21.899.6GSM226274YHB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
21.799.6GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
21.599.6ArrayExpressCapper_1-9_E6_estradiol---
21.499.6GSM158703WT-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
21.399.6GSM2531618h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
21.199.6GSM226275YHB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
20.799.6GSM2531606h into an extended nightGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
20.599.6GSM226271phyAphyB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
20.499.6GSM25316324h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
20.299.6GSM158702HY213-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
19.899.6ArrayExpressE-MEXP-1112-raw-cel-1590665741---
19.799.6GSM40555Polysomal mRNA - Hypoxia stressGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
19.599.6GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
19.299.6GSM226281YHB_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
19.199.6GSM253198RGA-GR-DEX-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
18.599.5GSM226267WT(Ler)_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
18.599.5GSM226273YHB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
18.599.5GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
18.499.5ArrayExpressE-TABM-63-raw-cel-681137195---
18.199.5GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
17.799.5ArrayExpressE-MEXP-475-raw-cel-680982458---
17.399.5ArrayExpressCapper_1-7_D9_estradiol---
17.299.5GSM142778AM002_ATH1_A3-MCCOR-GFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
17.199.5GSM142820PJ002_ATH1_A1-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
17.199.5GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
17.199.5GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
16.899.5ArrayExpressCapper_1-4_B8_water---
16.799.5GSM40553Total RNA - hypoxia stressGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
16.699.5GSM253196RGA-GR-DEX-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
16.499.5GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
16.399.5ArrayExpressCapper_1-10_E6_water---
15.999.5GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
15.699.5ArrayExpressE-MEXP-1468-raw-cel-1591138919---
15.399.4GSM142772AM002_ATH1_A7-MCCOR-GFBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
15.299.4GSM142822PJ002_ATH1_A3-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
15.199.4ArrayExpressRente_1-1_WS2-HO_Rep1_ATH1---
14.999.4GSM7718004h low CO2 + dark replicate BGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expressionLink to GEO
14.899.4GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
14.799.4GSM133402Knight_2-4_sfr6-dk_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
14.799.4ArrayExpressCapper_1-1_A3_estradiol---
14.099.4ArrayExpressE-MEXP-1299-raw-cel-1519903415---
13.899.4ArrayExpressE-MEXP-475-raw-cel-680982395---
13.799.4ArrayExpressE-MEXP-475-raw-cel-680982512---
13.799.4GSM245917wild type dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
13.799.4ArrayExpressE-MEXP-475-raw-cel-680982521---
13.799.4GSM142826PJ002_ATH1_A7-jarvis-B1798GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
13.699.4GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.699.4GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
13.599.4GSM142821PJ002_ATH1_A2-jarvis-iae1GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
13.599.4ArrayExpressCapper_1-8_D9_water---
13.399.4GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
13.399.4ArrayExpressCapper_1-11_E10_estradiol---
13.299.4GSM142779AM002_ATH1_A4-MCCOR-GDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
13.299.4GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
13.199.4ArrayExpressCapper_1-3_B8_estradiol---
12.999.3GSM226278WT(Ler)_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
12.999.3GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
12.799.3GSM13782Dexamethasone - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
12.799.3ArrayExpressE-MEXP-1468-raw-cel-1591138952---
12.799.3ArrayExpressE-MEXP-1112-raw-cel-1590665273---
12.799.3GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
12.699.3GSM2531628h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
12.599.3GSM226276WT(Ler)_Rc15_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
12.399.3GSM40552Total RNA, non-stressedGSE2218Changes in transcript abundance and association with large polysomes in response to hypoxia stressLink to GEO
12.099.3GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.099.3GSM245918wild type dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.999.3GSM158701HY213-MOCK-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
11.699.3GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
11.599.3GSM2531584h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
11.499.3ArrayExpressE-MEXP-1299-raw-cel-1519901992---
11.499.3GSM142776AM002_ATH1_A1-MCCOR-WFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
11.499.3GSM25316424h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
11.399.3ArrayExpressCapper_1-12_E10_water---
11.299.2ArrayExpressE-MEXP-1468-raw-cel-1591139018---
11.299.2GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.299.2ArrayExpressE-MEXP-1299-raw-cel-1519902256---
11.099.2GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
10.999.2GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.899.2GSM226279WT(Ler)_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
10.699.2GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.699.2ArrayExpressE-MEXP-1299-raw-cel-1519902698---
10.399.2GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.399.2ArrayExpressE-TABM-63-raw-cel-681137124---
10.399.2GSM156793albino rep2GSE6788Expression data of an albino mutant DS 13-2198-1Link to GEO
10.299.2ArrayExpressE-MEXP-1304-raw-cel-1530620505---
10.299.2ArrayExpressE-MEXP-1112-raw-cel-1590665689---
10.299.2ArrayExpressE-MEXP-475-raw-cel-680982386---
10.099.2ArrayExpressE-MEXP-1468-raw-cel-1591138985---
9.999.1GSM13778DexamethasoneGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
9.999.1GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.999.1GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.899.1GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.899.1GSM142828PJ002_ATH1_A9-jarvis-B1798GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
9.899.1GSM253197RGA-GR-MOCK-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible systemLink to GEO
9.899.1GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
9.799.1ArrayExpressE-MEXP-475-raw-cel-680982485---
9.699.1GSM245916wild type dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
9.599.1ArrayExpressE-MEXP-475-raw-cel-680982476---
9.499.1ArrayExpressE-MEXP-1468-raw-cel-1591138787---
9.499.1GSM226277WT(Ler)_Rc15_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.299.1ArrayExpressCapper_1-6_C3_water---
9.299.1GSM156791albino rep1GSE6788Expression data of an albino mutant DS 13-2198-1Link to GEO
9.299.1GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.199.1GSM158706WT-ESTRADIOL-REP2GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
9.099.1GSM131194AtGen_D-28_2-RS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.099.1GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
9.099.1GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
9.099.1ArrayExpressE-MEXP-1299-raw-cel-1519902420---
8.999.0GSM142780AM002_ATH1_A5-MCCOR-WFBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
8.999.0GSM142773AM002_ATH1_A8-MCCOR-GDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
8.899.0GSM133721Deeken_A-1-Deeke-Tum_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
8.799.0GSM142827PJ002_ATH1_A8-jarvis-B1798GSE6175Clarification of the genetic basis of the iae1 and iae2 phenotypesLink to GEO
8.799.0GSM142774AM002_ATH1_A9-MCCOR-AFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
8.799.0GSM13781MockGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
8.799.0GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO



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