Specifically-expressed experiments

Gene ID At4g30290
Gene name XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19)
Functional description putative xyloglucan endotransglycosylase/hydrolase, expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
61.799.8ArrayExpressE-MEXP-1304-raw-cel-1530618068---
57.899.8ArrayExpressE-MEXP-1304-raw-cel-1530618235---
48.699.8ArrayExpressE-MEXP-1304-raw-cel-1530618203---
46.999.8ArrayExpressE-MEXP-807-raw-cel-1173273196---
43.999.8ArrayExpressE-MEXP-1304-raw-cel-1530618171---
43.399.8ArrayExpressE-MEXP-1304-raw-cel-1530618003---
42.099.8ArrayExpressE-MEXP-1304-raw-cel-1530618104---
40.499.8ArrayExpressE-MEXP-1797-raw-cel-1669768048---
38.799.8ArrayExpressCornah_1-12_A4-wsx_Rep3_ATH1---
38.799.8ArrayExpressE-MEXP-1304-raw-cel-1530618275---
35.999.7ArrayExpressE-MEXP-1304-raw-cel-1530618136---
35.599.7ArrayExpressE-MEXP-1304-raw-cel-1530617900---
35.399.7ArrayExpressE-MEXP-1304-raw-cel-1530618033---
35.299.7ArrayExpressE-MEXP-1784-raw-cel-1661573032---
32.699.7ArrayExpressE-NASC-78-raw-cel-1463195267---
32.099.7ArrayExpressE-MEXP-807-raw-cel-1173273170---
32.099.7ArrayExpressE-MEXP-807-raw-cel-1173273088---
31.999.7ArrayExpressE-MEXP-1304-raw-cel-1530617971---
31.699.7ArrayExpressE-NASC-78-raw-cel-1463195219---
30.899.7ArrayExpressE-MEXP-849-raw-cel-1181981022---
30.499.7ArrayExpressE-MEXP-1304-raw-cel-1530617935---
29.799.7ArrayExpressE-MEXP-1784-raw-cel-1661573160---
29.099.7ArrayExpressE-MEXP-807-raw-cel-1173273223---
28.199.7ArrayExpressE-MEXP-1784-raw-cel-1661573074---
27.899.7GSM184889Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
27.399.7GSM184890Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
26.999.7GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
26.999.7GSM173623Col-0 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
26.899.7ArrayExpressE-MEXP-1784-raw-cel-1661572909---
26.399.7GSM216904ga1-3_shoots_1h_GA4_repl3GSE8739Early gibberellin responses in ArabidopsisLink to GEO
26.399.7ArrayExpressE-MEXP-1784-raw-cel-1661573138---
26.399.7ArrayExpressE-MEXP-1784-raw-cel-1661573096---
26.299.7ArrayExpressE-MEXP-1797-raw-cel-1669767958---
26.199.7ArrayExpressE-MEXP-807-raw-cel-1173273116---
24.599.6GSM133989Birnbaum_1-22_gl2-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
23.799.6ArrayExpressE-MEXP-715-raw-cel-1121835979---
23.499.6ArrayExpressE-MEXP-1784-raw-cel-1661572888---
23.499.6ArrayExpressE-MEXP-807-raw-cel-1173273060---
23.099.6ArrayExpressE-MEXP-1784-raw-cel-1661573173---
22.699.6ArrayExpressE-MEXP-1784-raw-cel-1661573186---
21.999.6GSM270814Arabidopsis cell culture, 4 h_control_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
21.999.6GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
21.899.6GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
21.699.6GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
21.399.6GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.299.6ArrayExpressE-MEXP-1784-raw-cel-1661573117---
20.299.6GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.199.6GSM131183AtGen_D-15_1-US_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.899.6GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
19.799.6GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
19.499.6ArrayExpressE-MEXP-1299-raw-cel-1519902994---
19.199.6GSM133970Birnbaum_1-21_LRC-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
18.899.5ArrayExpressE-MEXP-849-raw-cel-1181981038---
18.699.5ArrayExpressE-MEXP-715-raw-cel-1121836247---
18.299.5GSM270853Arabidopsis cell culture, 4 h_control_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
18.099.5ArrayExpressE-ATMX-31-raw-cel-1516947916---
17.999.5ArrayExpressE-MEXP-1256-raw-cel-1502196386---
17.399.5GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.099.5GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
16.999.5GSM131609ATGE_43_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
16.699.5GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
16.699.5GSM131213AtGen_D-47_3-US_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.599.5GSM216906ga1-3_shoots_1h_GA4_repl4GSE8739Early gibberellin responses in ArabidopsisLink to GEO
16.599.5ArrayExpressE-MEXP-807-raw-cel-1173273144---
16.299.5GSM131194AtGen_D-28_2-RS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.199.5GSM216895ga1-3_shoots_1h_water_repl3GSE8739Early gibberellin responses in ArabidopsisLink to GEO
15.799.5GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.699.5GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.599.5GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.399.4GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.399.4ArrayExpressE-MEXP-849-raw-cel-1181981046---
15.399.4ArrayExpressE-MEXP-1784-raw-cel-1661572930---
15.299.4ArrayExpressE-MEXP-715-raw-cel-1121836221---
14.999.4GSM131610ATGE_43_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.599.4GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
14.499.4GSM131611ATGE_43_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.299.4ArrayExpressE-MEXP-807-raw-cel-1173273252---
14.199.4ArrayExpressE-MEXP-1797-raw-cel-1669767976---
14.099.4GSM173649mARF10 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
14.099.4GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.799.4GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.699.4GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.699.4GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
13.699.4GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
13.699.4GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.699.4ArrayExpressE-MEXP-1797-raw-cel-1669767985---
13.599.4ArrayExpressE-NASC-78-raw-cel-1463195235---
13.599.4GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
13.499.4GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
13.399.4GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
13.299.4GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
13.199.4GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.199.4GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
13.099.4ArrayExpressE-MEXP-1784-raw-cel-1661572978---
13.099.4GSM131197AtGen_D-31_2-US_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.799.3GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.799.3GSM173628ARF10 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
12.799.3GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.799.3GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
12.699.3GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
12.599.3GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.599.3GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.499.3ArrayExpressE-MEXP-1797-raw-cel-1669768066---
12.399.3ArrayExpressE-MEXP-849-raw-cel-1181981030---
12.399.3GSM131198AtGen_D-32_2-WS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.299.3GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.199.3GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.199.3GSM216896ga1-3_shoots_1h_water_repl4GSE8739Early gibberellin responses in ArabidopsisLink to GEO
12.199.3ArrayExpressE-MEXP-1784-raw-cel-1661573053---
12.199.3ArrayExpressE-MEXP-715-raw-cel-1121836005---
11.999.3GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.999.3ArrayExpressE-MEXP-1784-raw-cel-1661572952---
11.799.3ArrayExpressE-MEXP-715-raw-cel-1121836113---
11.799.3GSM131181AtGen_D-13_1-BS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.699.3ArrayExpressE-MEXP-1797-raw-cel-1669767940---
11.599.3GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
11.299.2GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.299.2GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
11.199.2ArrayExpressE-MEXP-849-raw-cel-1181981014---
10.799.2GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
10.599.2GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
10.599.2ArrayExpressE-MEXP-722-raw-cel-1062243516---
10.499.2GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.499.2GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.499.2GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.399.2ArrayExpressE-ATMX-31-raw-cel-1516947899---
10.299.2GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.199.2GSM142882CW001_ATH1_A1.1-WestC-wsuGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
10.099.2ArrayExpressE-NASC-78-raw-cel-1463195187---
10.099.2GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.099.2ArrayExpressE-MEXP-1784-raw-cel-1661572965---
9.999.1GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.999.1ArrayExpressE-MEXP-1797-raw-cel-1669768030---
9.799.1GSM27365lec1-1 RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
9.699.1GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.599.1GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.499.1GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.499.1GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.499.1ArrayExpressE-MEXP-637-raw-cel-913039258---
9.399.1GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
9.399.1ArrayExpressE-MEXP-1797-raw-cel-1669768075---
9.399.1GSM131560ATGE_9_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.299.1GSM206274Wild type, chitooctaose treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
9.199.1GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.199.1ArrayExpressE-MEXP-1112-raw-cel-1590665533---
9.099.1ArrayExpressE-MEXP-849-raw-cel-1181981006---
9.099.1GSM173629ARF10 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
8.999.0ArrayExpressE-MEXP-1797-raw-cel-1669768057---
8.999.0GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.899.0GSM226267WT(Ler)_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
8.899.0GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.899.0GSM133727McCormac_1-5_wildtype-Contrl_Rep2_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
8.799.0GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
8.799.0GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
8.799.0GSM206275Wild type, chitooctaose treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
8.799.0GSM173624Col-0 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
8.799.0ArrayExpressE-MEXP-1797-raw-cel-1669767967---
8.799.0GSM206276Wild type, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO



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