Specifically-expressed experiments

Gene ID At4g27730
Gene name OPT6 (OLIGOPEPTIDE TRANSPORTER 1)
Functional description oligopeptide transporter

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
187.7100.0GSM133761Lindsey_1-13_torpedo-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
162.099.9GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
125.499.9GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
121.499.9ArrayExpressE-MEXP-1725-raw-cel-1669614603---
118.799.9ArrayExpressE-MEXP-1725-raw-cel-1669614572---
104.899.9ArrayExpressE-MEXP-1725-raw-cel-1669614613---
95.199.9ArrayExpressE-MEXP-1725-raw-cel-1669614592---
89.499.9GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
79.499.9GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
59.699.8GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
54.599.8ArrayExpressE-MEXP-1094-raw-cel-1379507193---
54.299.8GSM133319RIKEN-LI5AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
54.299.8ArrayExpressE-MEXP-849-raw-cel-1181980998---
52.899.8GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
52.399.8GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
48.399.8ArrayExpressE-MEXP-1094-raw-cel-1379507473---
47.299.8ArrayExpressE-MEXP-1094-raw-cel-1379507233---
46.599.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
46.499.8GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
46.499.8ArrayExpressE-MEXP-1094-raw-cel-1379507433---
44.499.8GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
44.099.8GSM133313RIKEN-LI2AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
41.399.8GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
40.999.8GSM133311RIKEN-LI1AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
38.099.8ArrayExpressE-MEXP-849-raw-cel-1181980990---
37.799.7GSM133317RIKEN-LI4AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
35.499.7GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.399.7GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
32.899.7GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
31.199.7GSM133314RIKEN-LI2BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
28.299.7ArrayExpressE-MEXP-849-raw-cel-1181981006---
27.999.7GSM133315RIKEN-LI3AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
26.199.7GSM128664Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
25.799.7ArrayExpressE-MEXP-849-raw-cel-1181981046---
25.699.7GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.599.7ArrayExpressE-MEXP-849-raw-cel-1181981030---
25.399.6ArrayExpressE-MEXP-1094-raw-cel-1379507513---
24.599.6GSM133321RIKEN-LI6AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
24.299.6ArrayExpressE-MEXP-849-raw-cel-1181981038---
23.099.6GSM133318RIKEN-LI4BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
22.199.6ArrayExpressE-MEXP-849-raw-cel-1181981022---
21.999.6GSM133312RIKEN-LI1BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
20.899.6GSM244452Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
20.499.6GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
20.199.6GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.599.6GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.499.6GSM244451Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
19.499.6GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.399.6GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.299.6ArrayExpressE-MEXP-1094-raw-cel-1379507313---
18.899.5GSM244444Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
18.699.5GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.499.5GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
17.999.5GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.899.5GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
17.399.5GSM299334Wild Type Germinating Seeds With Uniconazole Treatment Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
17.199.5GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
17.099.5ArrayExpressE-MEXP-849-raw-cel-1181981014---
16.899.5GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.799.5GSM133316RIKEN-LI3BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
16.599.5ArrayExpressE-NASC-76-raw-cel-1359878925---
16.299.5ArrayExpressE-NASC-76-raw-cel-1359878850---
15.699.5GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
14.899.4GSM244446Arabidopsis wild-type_2-4 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
14.899.4GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
14.699.4GSM270865Arabidopsis cell culture, 4 h_control_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
14.499.4GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.299.4GSM299333Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
14.299.4GSM173628ARF10 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
14.099.4GSM133322RIKEN-LI6BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
14.099.4ArrayExpressE-MEXP-1094-raw-cel-1379507553---
14.099.4GSM299338Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
13.899.4GSM128663Underwood_1-16_Cor-hrpS-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.499.4ArrayExpressE-MEXP-849-raw-cel-1181980982---
13.499.4GSM173623Col-0 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
13.399.4GSM299335Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
12.599.3GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.199.3ArrayExpressE-ATMX-28-raw-cel-1441104826---
11.999.3GSM133320RIKEN-LI5BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
11.999.3ArrayExpressE-MEXP-98-raw-cel-320189079---
11.799.3GSM299409pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.699.3GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
11.699.3ArrayExpressE-NASC-76-raw-cel-1359879056---
11.699.3GSM299336Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.699.3GSM299341pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.599.3GSM299408pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
11.499.3ArrayExpressE-ATMX-28-raw-cel-1441104844---
11.199.2GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.899.2ArrayExpressE-MEXP-807-raw-cel-1173272977---
10.799.2GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
10.799.2GSM299337Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.699.2GSM299339pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
10.599.2GSM173629ARF10 rep3GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
10.399.2GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.399.2GSM244453Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.199.2ArrayExpressE-MEXP-1094-raw-cel-1379507273---
10.099.2ArrayExpressE-MEXP-1607-raw-cel-1620685778---
9.999.1GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.899.1ArrayExpressE-MEXP-98-raw-cel-320188804---
9.799.1GSM299322Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.799.1GSM299328pkl Mutant Germinating Seeds With Solvent Treatment Only Set 2 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
9.699.1GSM161536Experiment:Dexamethasone induction of GR-REV transgenic Ler seedlingsGSE7003Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor. Link to GEO
9.699.1GSM142854MG001_ATH1_A7-Torres-3N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.499.1GSM157358Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
9.399.1ArrayExpressE-MEXP-739-raw-cel-1099467402---
9.299.1GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.199.1GSM270853Arabidopsis cell culture, 4 h_control_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
9.099.1GSM299410pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
8.999.0ArrayExpressE-MEXP-739-raw-cel-1099467419---
8.899.0GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.799.0GSM299327pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seedsLink to GEO
8.699.0ArrayExpressE-ATMX-28-raw-cel-1441104835---



Back to the CoP portal site

Back to the KAGIANA project homepage