Specifically-expressed experiments

Gene ID	At4g27654
Gene name	unknown protein
Functional description	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
166.5	100.0	GSM218585	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
118.7	99.9	GSM218586	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
118.0	99.9	GSM142658	MC002_ATH1_A12.3-dubos-arh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
107.8	99.9	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
90.7	99.9	GSM142649	MC002_ATH1_A9.3-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
90.3	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273196	-	-	-
89.1	99.9	GSM142654	MC002_ATH1_A11.2-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
87.7	99.9	GSM142648	MC002_ATH1_A9.2-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
86.0	99.9	GSM142647	MC002_ATH1_A9.1-dubos-aah	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
83.0	99.9	GSM142655	MC002_ATH1_A11.3-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
83.0	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273223	-	-	-
81.0	99.9	GSM142653	MC002_ATH1_A11.1-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
80.7	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
77.9	99.9	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
77.6	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
77.5	99.9	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
75.4	99.9	GSM184492	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
72.3	99.9	GSM142657	MC002_ATH1_A12.2-dubos-arh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
67.4	99.8	GSM142632	MC002_ATH1_A4.1-dubos-6kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
64.6	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
63.9	99.8	GSM142635	MC002_ATH1_A5.1-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
61.8	99.8	GSM218587	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
61.5	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
59.5	99.8	GSM142637	MC002_ATH1_A5.3-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
56.3	99.8	GSM339543	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -5	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
56.0	99.8	GSM184491	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
55.9	99.8	GSM142662	MB002_ATH1_A2-Eland-ch2	GSE6153	Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
54.8	99.8	GSM142656	MC002_ATH1_A12.1-dubos-arh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
54.3	99.8	GSM142644	MC002_ATH1_A8.1-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
49.8	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
45.5	99.8	GSM142630	MC002_ATH1_A3.2-dubos-6kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
43.8	99.8	GSM142646	MC002_ATH1_A8.3-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
42.5	99.8	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
42.5	99.8	GSM184493	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
41.2	99.8	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.7	99.8	GSM173449	oxt6:AtCPSF30 line 5, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
40.7	99.8	GSM142645	MC002_ATH1_A8.2-dubos-aih	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
40.1	99.8	GSM184553	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
38.1	99.8	GSM184502	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.0	99.7	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
35.9	99.7	GSM142661	MB002_ATH1_A1-Eland-ch1	GSE6153	Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
34.8	99.7	GSM133066	2503	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
32.8	99.7	GSM142633	MC002_ATH1_A4.2-dubos-6kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
31.5	99.7	GSM142882	CW001_ATH1_A1.1-WestC-wsu	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
31.0	99.7	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
30.5	99.7	GSM142634	MC002_ATH1_A4.3-dubos-6kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
29.4	99.7	GSM133717	Urwin_A-1-Urwin-Con_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
29.0	99.7	GSM260883	Yap_A2-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
28.1	99.7	GSM237283	Root Selenate rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
27.8	99.7	GSM339547	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -9	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
27.2	99.7	GSM173448	oxt6:AtCPSF30 line 5, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
27.0	99.7	GSM128882	Mittler_1-6_MBF1c_Rep3_ATH1	GSE5539	Over-expression of MBF1c enhances stress tolerance
26.8	99.7	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
26.0	99.7	GSM142636	MC002_ATH1_A5.2-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
26.0	99.7	GSM133056	2798	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
25.9	99.7	GSM237282	Root Selenate rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
25.2	99.6	GSM128880	Mittler_1-4_MBF1c_Rep1_ATH1	GSE5539	Over-expression of MBF1c enhances stress tolerance
22.8	99.6	GSM142629	MC002_ATH1_A3.1-dubos-6kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
22.4	99.6	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
22.3	99.6	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
22.3	99.6	GSM173442	wild-type Arabidopsis, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
21.5	99.6	ArrayExpress	E-MEXP-98-raw-cel-320188914	-	-	-
21.2	99.6	GSM131558	ATGE_9_A	GSE5631	AtGenExpress: Developmental series (roots)
21.0	99.6	GSM131559	ATGE_9_B	GSE5631	AtGenExpress: Developmental series (roots)
20.6	99.6	GSM128881	Mittler_1-5_MBF1c_Rep2_ATH1	GSE5539	Over-expression of MBF1c enhances stress tolerance
20.3	99.6	GSM260882	Yap_A1-AMF_Rep2	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
19.7	99.6	ArrayExpress	E-MEXP-98-raw-cel-320188694	-	-	-
19.2	99.6	GSM142883	CW001_ATH1_A1.2-WestC-wsb	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
19.1	99.6	GSM133812	Diamond_A-1-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
19.1	99.6	ArrayExpress	E-MEXP-98-raw-cel-320188749	-	-	-
18.6	99.5	GSM339542	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -4	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
18.2	99.5	GSM173443	wild-type Arabidopsis, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
18.2	99.5	GSM184485	Epidermis&Cortex root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.1	99.5	GSM339541	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -3	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
17.5	99.5	GSM131560	ATGE_9_C	GSE5631	AtGenExpress: Developmental series (roots)
17.4	99.5	GSM142631	MC002_ATH1_A3.3-dubos-6kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
17.2	99.5	GSM184501	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.0	99.5	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
16.9	99.5	GSM133814	Diamond_A-3-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
16.8	99.5	GSM133041	2525	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
16.7	99.5	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.3	99.5	GSM184498	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.2	99.5	GSM184552	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.1	99.5	GSM133068	2530	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
15.4	99.5	GSM218591	Whole roots 3.5hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.1	99.4	GSM184503	Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.7	99.4	GSM184489	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.6	99.4	GSM184488	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.6	99.4	GSM184527	Stele root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.0	99.4	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.6	99.4	GSM173444	wild-type Arabidopsis, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
13.3	99.4	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.3	99.4	GSM184508	Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.1	99.4	GSM131493	ATGE_101_B	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
12.9	99.3	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.6	99.3	GSM133813	Diamond_A-2-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
12.3	99.3	GSM133815	Diamond_A-4-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
12.0	99.3	GSM133809	Diamond_A-2-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.7	99.3	GSM218594	Whole roots 3.5hr KNO3 treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.6	99.3	GSM133811	Diamond_A-4-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.4	99.3	GSM133064	2528	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
11.3	99.3	ArrayExpress	E-MEXP-1443-raw-cel-1581869688	-	-	-
11.2	99.2	GSM173445	oxt6 mutant, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
11.2	99.2	GSM131492	ATGE_101_A	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
10.6	99.2	GSM184913	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.6	99.2	GSM133768	Lindsey_1-20_torpedo-basal_Rep5_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.5	99.2	GSM142884	CW001_ATH1_A1.3-WestC-kuu	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
10.5	99.2	GSM133065	2529	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.4	99.2	GSM133052	2795	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.3	99.2	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.3	99.2	GSM184557	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	GSM339546	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -8	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
9.6	99.1	GSM133808	Diamond_A-1-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
9.5	99.1	GSM184490	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.4	99.1	GSM133810	Diamond_A-3-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
9.1	99.1	GSM142640	MC002_ATH1_A6.3-dubos-5kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.0	99.1	GSM131494	ATGE_101_C	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
8.8	99.0	GSM184555	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.7	99.0	GSM133718	Urwin_A-2-Urwin-Inf_SLD	GSE5724	Plant gene expression associated with susceptibility to nematodes
8.7	99.0	GSM133043	2785	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.6	99.0	ArrayExpress	E-MEXP-791-raw-cel-1122937533	-	-	-

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