Specifically-expressed experiments

Gene ID At4g25820
Gene name XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)
Functional description Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
158.299.9GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
131.999.9GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
122.599.9GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
114.399.9GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
95.599.9GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
81.899.9ArrayExpressE-MEXP-1304-raw-cel-1530617900---
78.099.9ArrayExpressE-MEXP-722-raw-cel-1062243470---
77.099.9ArrayExpressE-MEXP-722-raw-cel-1062243516---
70.199.9GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
67.499.8GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
57.399.8GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
54.399.8ArrayExpressE-MEXP-1304-raw-cel-1530617971---
53.799.8ArrayExpressE-MEXP-722-raw-cel-1062243559---
45.399.8ArrayExpressE-MEXP-1304-raw-cel-1530618104---
44.299.8GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
42.499.8ArrayExpressE-MEXP-1304-raw-cel-1530618068---
39.899.8ArrayExpressE-MEXP-1304-raw-cel-1530618203---
38.899.8GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
38.799.8ArrayExpressE-MEXP-1304-raw-cel-1530618003---
36.599.7GSM184935Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
35.199.7GSM133269RIKEN-GODA6A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
33.999.7GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
33.399.7ArrayExpressE-MEXP-722-raw-cel-1062243429---
33.099.7ArrayExpressE-MEXP-722-raw-cel-1062242948---
32.699.7ArrayExpressE-MEXP-1784-raw-cel-1661573186---
32.499.7GSM133284RIKEN-GODA4B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
32.099.7GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
31.399.7GSM133273RIKEN-GODA8A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
31.199.7ArrayExpressE-MEXP-1304-raw-cel-1530617935---
30.299.7ArrayExpressE-MEXP-1784-raw-cel-1661573160---
30.299.7ArrayExpressE-MEXP-1784-raw-cel-1661573173---
29.399.7GSM133261RIKEN-GODA2A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
28.299.7GSM133283RIKEN-GODA4A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
27.999.7GSM142695MH001_ATH1_A9-grevi-CT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
27.499.7GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
27.199.7GSM133275RIKEN-GODA9A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
25.999.7GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
24.899.6GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
24.699.6GSM133259RIKEN-GODA1A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
24.199.6GSM133803Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
23.999.6GSM133268RIKEN-GODA5B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
23.799.6GSM133267RIKEN-GODA5A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
23.699.6GSM265461Arabidopsis, whole roots, standard conditions, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
22.599.6GSM133271RIKEN-GODA7A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.499.6GSM133276RIKEN-GODA9B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
21.599.6GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
21.399.6ArrayExpressE-MEXP-722-raw-cel-1062243390---
21.399.6GSM133264RIKEN-GODA3B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
21.199.6GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.899.6GSM133262RIKEN-GODA2B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.799.6GSM133265RIKEN-GODA4A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.799.6ArrayExpressE-MEXP-722-raw-cel-1062242857---
20.599.6GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
20.599.6GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.399.6GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
20.399.6GSM133277RIKEN-GODA1A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
20.099.6GSM131845Pracharoenwattana_1-2_mdhB_Rep2_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
20.099.6GSM133281RIKEN-GODA3A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
20.099.6ArrayExpressE-MEXP-1304-raw-cel-1530618033---
19.999.6GSM131847Pracharoenwattana_1-4_ColA_Rep1_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
19.899.6ArrayExpressE-MEXP-635-raw-cel-912819840---
19.899.6ArrayExpressE-MEXP-1304-raw-cel-1530618171---
19.699.6GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
19.599.6GSM133263RIKEN-GODA3A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.599.6ArrayExpressE-MEXP-722-raw-cel-1062243183---
19.499.6GSM133282RIKEN-GODA3B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
19.299.6GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
19.199.6GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
19.099.5GSM133280RIKEN-GODA2B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
18.599.5GSM133279RIKEN-GODA2A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
18.499.5GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
18.399.5ArrayExpressE-MEXP-722-raw-cel-1062243314---
18.299.5GSM142697MH001_ATH1_A11-grevi-AT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
18.099.5GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
18.099.5GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.999.5GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.899.5GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
17.899.5GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.699.5GSM133272RIKEN-GODA7B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.499.5GSM131846Pracharoenwattana_1-3_mdhC_Rep3_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
17.299.5GSM133274RIKEN-GODA8B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.299.5GSM39210RRE2_C4GSE2169rre1 and rre2 mutantsLink to GEO
17.199.5GSM142696MH001_ATH1_A10-grevi-AT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
16.899.5GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
16.899.5ArrayExpressCornah_1-11_A3-msx_Rep3_ATH1---
16.499.5GSM142698MH001_ATH1_A12-grevi-AT3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
16.499.5GSM39209RRE2_C3GSE2169rre1 and rre2 mutantsLink to GEO
16.399.5GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.399.5GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
16.399.5GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
16.199.5GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
16.199.5GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.199.5GSM39199Col_C1GSE2169rre1 and rre2 mutantsLink to GEO
15.699.5GSM39194RRE1_C4GSE2169rre1 and rre2 mutantsLink to GEO
15.699.5GSM133807Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
15.699.5GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
15.599.5GSM133251RIKEN-GODA10A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
15.499.5ArrayExpressE-MEXP-722-raw-cel-1062243108---
15.499.5GSM142694MH001_ATH1_A8-grevi-CT2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
15.399.4GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
15.199.4GSM184925Arabidopsis, whole roots, standard conditions, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
15.099.4GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
14.599.4ArrayExpressE-MEXP-722-raw-cel-1062243048---
14.599.4GSM133260RIKEN-GODA1B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
14.299.4GSM142693MH001_ATH1_A7-grevi-CT1GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
13.999.4GSM142725CH001_ATH1_A004-Hampt-c1aGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
13.799.4GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
13.699.4GSM133278RIKEN-GODA1B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
13.399.4GSM131849Pracharoenwattana_1-6_ColC_Rep3_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
13.399.4GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
13.299.4ArrayExpressE-MEXP-637-raw-cel-913038965---
13.299.4GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
13.099.4GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
13.099.4ArrayExpressE-MEXP-1304-raw-cel-1530618275---
12.899.3ArrayExpressE-MEXP-635-raw-cel-912819824---
12.399.3GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
12.199.3GSM142669SF002_ATH1_A7-Fille-ANGR4-12nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
12.099.3GSM131844Pracharoenwattana_1-1_mdhA_Rep1_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
11.799.3GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
11.799.3GSM265462Arabidopsis, whole roots, standard conditions, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
11.699.3ArrayExpressE-MEXP-791-raw-cel-1122937587---
11.699.3ArrayExpressE-MEXP-637-raw-cel-913038938---
11.499.3ArrayExpressE-MEXP-722-raw-cel-1062243239---
11.499.3GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
11.299.2GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.099.2ArrayExpressE-MEXP-1304-raw-cel-1530618136---
11.099.2GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
10.899.2GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
10.899.2GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.799.2GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.799.2GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
10.699.2GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
10.699.2GSM184903Arabidopsis, root cells, stele, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.699.2GSM133893Schroeder_1-9_JS46-starve-48h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
10.599.2GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
10.599.2ArrayExpressE-MEXP-1784-raw-cel-1661572930---
10.399.2GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
10.399.2GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
10.399.2GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
10.299.2GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.299.2GSM133802Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
10.299.2GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
10.199.2GSM157331Coates_1-3_Col-3_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.199.2GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
10.099.2GSM131848Pracharoenwattana_1-5_ColB_Rep2_ATH1GSE5641Peroxisomal mdh mutantLink to GEO
9.999.1GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.899.1GSM184844Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
9.899.1GSM39193RRE1_C3GSE2169rre1 and rre2 mutantsLink to GEO
9.799.1ArrayExpressE-MEXP-1784-raw-cel-1661572909---
9.799.1ArrayExpressE-MEXP-1784-raw-cel-1661572888---
9.699.1GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.599.1GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.499.1GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
9.499.1GSM260880Yap_A1-AMFGSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
9.399.1GSM39208RRE2_C2GSE2169rre1 and rre2 mutantsLink to GEO
9.399.1GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
9.299.1GSM109115vte2-1(Col-0) 1 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
9.299.1GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
9.299.1GSM157305Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
9.199.1GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
9.199.1GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.099.1GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
8.999.0GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
8.999.0GSM39201Col_C3GSE2169rre1 and rre2 mutantsLink to GEO
8.999.0GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
8.899.0GSM153924ABA control rep1GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABALink to GEO
8.799.0GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.799.0GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
8.699.0GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO



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