CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At4g25140

Gene name OLEO1 (OLEOSIN 1)

Functional description Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
231.5 100.0 ArrayExpress E-ATMX-1-raw-cel-1112746209 - - -
212.5 100.0 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
201.7 100.0 GSM305284 estradiol induced, biological replicate 2 GSE12137 LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
200.3 100.0 ArrayExpress E-ATMX-1-raw-cel-1112746267 - - -
197.8 100.0 GSM131704 ATGE_83_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
196.9 100.0 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
194.6 100.0 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
194.3 100.0 GSM10451 WT Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
170.7 100.0 GSM305282 estradiol induced, biological replicate 1 GSE12137 LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
162.1 99.9 GSM10453 WT Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
162.1 99.9 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
161.2 99.9 ArrayExpress E-ATMX-1-raw-cel-1112746095 - - -
156.4 99.9 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
156.0 99.9 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
152.7 99.9 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
145.1 99.9 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
144.0 99.9 ArrayExpress E-ATMX-1-raw-cel-1112746154 - - -
138.3 99.9 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
134.2 99.9 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
121.9 99.9 GSM133817 Yang_1-2_old-pod_Rep1_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
95.3 99.9 GSM133312 RIKEN-LI1B GSE5701 AtGenExpress: Basic hormone treatment of seeds
93.1 99.9 GSM131697 ATGE_81_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
87.3 99.9 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
82.5 99.9 GSM131694 ATGE_79_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
82.4 99.9 GSM133314 RIKEN-LI2B GSE5701 AtGenExpress: Basic hormone treatment of seeds
80.9 99.9 GSM131698 ATGE_81_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
80.7 99.9 GSM131695 ATGE_79_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
77.8 99.9 GSM131696 ATGE_79_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
67.1 99.8 GSM133318 RIKEN-LI4B GSE5701 AtGenExpress: Basic hormone treatment of seeds
64.8 99.8 GSM133120 RIKEN-YAMAUCHI2B GSE5687 AtGenExpress: Different temperature treatment of seeds
55.7 99.8 ArrayExpress E-MEXP-849-raw-cel-1181980982 - - -
53.2 99.8 GSM10484 lec1-1 Post-Mature Green Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
50.0 99.8 GSM133320 RIKEN-LI5B GSE5701 AtGenExpress: Basic hormone treatment of seeds
47.9 99.8 GSM133316 RIKEN-LI3B GSE5701 AtGenExpress: Basic hormone treatment of seeds
47.8 99.8 ArrayExpress E-MEXP-849-raw-cel-1181980990 - - -
46.5 99.8 GSM153927 ahg1-1 rep2 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
45.8 99.8 GSM10483 lec1-1 Post-Mature Green Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
38.5 99.8 ArrayExpress E-MEXP-849-raw-cel-1181980998 - - -
37.4 99.7 GSM131693 ATGE_78_F GSE5634 AtGenExpress: Developmental series (siliques and seeds)
35.2 99.7 GSM131692 ATGE_78_E GSE5634 AtGenExpress: Developmental series (siliques and seeds)
34.4 99.7 GSM131691 ATGE_78_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
33.4 99.7 GSM133315 RIKEN-LI3A GSE5701 AtGenExpress: Basic hormone treatment of seeds
30.8 99.7 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds
29.9 99.7 GSM133313 RIKEN-LI2A GSE5701 AtGenExpress: Basic hormone treatment of seeds
29.5 99.7 GSM133311 RIKEN-LI1A GSE5701 AtGenExpress: Basic hormone treatment of seeds
27.4 99.7 GSM10482 lec1-1 Mature Green Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
26.9 99.7 GSM153926 ahg1-1 rep1 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
22.3 99.6 GSM133317 RIKEN-LI4A GSE5701 AtGenExpress: Basic hormone treatment of seeds
19.9 99.6 GSM10481 lec1-1 Mature Green Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
19.5 99.6 GSM133319 RIKEN-LI5A GSE5701 AtGenExpress: Basic hormone treatment of seeds
18.7 99.5 GSM133119 RIKEN-YAMAUCHI2A GSE5687 AtGenExpress: Different temperature treatment of seeds
18.0 99.5 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
16.9 99.5 GSM133118 RIKEN-YAMAUCHI1B GSE5687 AtGenExpress: Different temperature treatment of seeds
15.6 99.5 GSM133322 RIKEN-LI6B GSE5701 AtGenExpress: Basic hormone treatment of seeds
12.6 99.3 ArrayExpress E-MEXP-849-raw-cel-1181981006 - - -
12.1 99.3 GSM153929 ahg3-1 rep2 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
11.8 99.3 GSM311267 Ws seedlings, biological rep2 GSE12401 Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
10.6 99.2 GSM133308 RIKEN-NAKABAYASHI4A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
10.5 99.2 GSM153928 ahg3-1 rep1 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
9.4 99.1 GSM133310 RIKEN-NAKABAYASHI5B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
9.3 99.1 GSM133309 RIKEN-NAKABAYASHI4B GSE5700 AtGenExpress: Effect of ABA during seed imbibition

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
231.5	100.0	ArrayExpress	E-ATMX-1-raw-cel-1112746209	-	-	-
212.5	100.0	GSM10456	WT Post-Mature Green Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
201.7	100.0	GSM305284	estradiol induced, biological replicate 2	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
200.3	100.0	ArrayExpress	E-ATMX-1-raw-cel-1112746267	-	-	-
197.8	100.0	GSM131704	ATGE_83_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
196.9	100.0	GSM10454	WT Post-Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
194.6	100.0	GSM131708	ATGE_84_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
194.3	100.0	GSM10451	WT Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
170.7	100.0	GSM305282	estradiol induced, biological replicate 1	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
162.1	99.9	GSM10453	WT Mature Green Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
162.1	99.9	GSM131700	ATGE_82_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
161.2	99.9	ArrayExpress	E-ATMX-1-raw-cel-1112746095	-	-	-
156.4	99.9	GSM131705	ATGE_83_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
156.0	99.9	GSM131703	ATGE_83_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
152.7	99.9	GSM131707	ATGE_84_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
145.1	99.9	GSM131701	ATGE_82_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
144.0	99.9	ArrayExpress	E-ATMX-1-raw-cel-1112746154	-	-	-
138.3	99.9	GSM131706	ATGE_84_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
134.2	99.9	GSM131702	ATGE_82_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
121.9	99.9	GSM133817	Yang_1-2_old-pod_Rep1_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
95.3	99.9	GSM133312	RIKEN-LI1B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
93.1	99.9	GSM131697	ATGE_81_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
87.3	99.9	GSM131699	ATGE_81_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
82.5	99.9	GSM131694	ATGE_79_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
82.4	99.9	GSM133314	RIKEN-LI2B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
80.9	99.9	GSM131698	ATGE_81_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
80.7	99.9	GSM131695	ATGE_79_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
77.8	99.9	GSM131696	ATGE_79_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
67.1	99.8	GSM133318	RIKEN-LI4B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
64.8	99.8	GSM133120	RIKEN-YAMAUCHI2B	GSE5687	AtGenExpress: Different temperature treatment of seeds
55.7	99.8	ArrayExpress	E-MEXP-849-raw-cel-1181980982	-	-	-
53.2	99.8	GSM10484	lec1-1 Post-Mature Green Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
50.0	99.8	GSM133320	RIKEN-LI5B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
47.9	99.8	GSM133316	RIKEN-LI3B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
47.8	99.8	ArrayExpress	E-MEXP-849-raw-cel-1181980990	-	-	-
46.5	99.8	GSM153927	ahg1-1 rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
45.8	99.8	GSM10483	lec1-1 Post-Mature Green Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
38.5	99.8	ArrayExpress	E-MEXP-849-raw-cel-1181980998	-	-	-
37.4	99.7	GSM131693	ATGE_78_F	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
35.2	99.7	GSM131692	ATGE_78_E	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
34.4	99.7	GSM131691	ATGE_78_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
33.4	99.7	GSM133315	RIKEN-LI3A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
30.8	99.7	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
29.9	99.7	GSM133313	RIKEN-LI2A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
29.5	99.7	GSM133311	RIKEN-LI1A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
27.4	99.7	GSM10482	lec1-1 Mature Green Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
26.9	99.7	GSM153926	ahg1-1 rep1	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
22.3	99.6	GSM133317	RIKEN-LI4A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
19.9	99.6	GSM10481	lec1-1 Mature Green Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
19.5	99.6	GSM133319	RIKEN-LI5A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
18.7	99.5	GSM133119	RIKEN-YAMAUCHI2A	GSE5687	AtGenExpress: Different temperature treatment of seeds
18.0	99.5	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
16.9	99.5	GSM133118	RIKEN-YAMAUCHI1B	GSE5687	AtGenExpress: Different temperature treatment of seeds
15.6	99.5	GSM133322	RIKEN-LI6B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
12.6	99.3	ArrayExpress	E-MEXP-849-raw-cel-1181981006	-	-	-
12.1	99.3	GSM153929	ahg3-1 rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
11.8	99.3	GSM311267	Ws seedlings, biological rep2	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
10.6	99.2	GSM133308	RIKEN-NAKABAYASHI4A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
10.5	99.2	GSM153928	ahg3-1 rep1	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
9.4	99.1	GSM133310	RIKEN-NAKABAYASHI5B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
9.3	99.1	GSM133309	RIKEN-NAKABAYASHI4B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition

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Gene ID	At4g25140
Gene name	OLEO1 (OLEOSIN 1)
Functional description	Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.