Specifically-expressed experiments

Gene ID	At4g24190
Gene name	SHD (SHEPHERD)
Functional description	encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.1	99.5	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.5	99.3	GSM226534	L4SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.4	99.3	ArrayExpress	E-NASC-76-raw-cel-1359878900	-	-	-
11.2	99.2	GSM311276	Laser capture microdissected (LCM) micropylar endospermr at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
10.8	99.2	GSM311275	Laser capture microdissected (LCM) micropylar endosperm at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
10.2	99.2	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.8	99.1	ArrayExpress	E-ATMX-34-raw-cel-1563627293	-	-	-
9.2	99.1	GSM252690	Section of Root from 270 mm to 340 mm harvested immediately rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
9.0	99.1	GSM226547	Slice5JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
8.6	99.0	ArrayExpress	E-NASC-76-raw-cel-1359879158	-	-	-
8.6	99.0	GSM252691	Section of Root from 270 mm to 340 mm harvested immediately rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
8.3	99.0	ArrayExpress	E-NASC-76-raw-cel-1359878976	-	-	-
8.0	98.9	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
8.0	98.9	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
8.0	98.9	GSM244454	Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
7.9	98.9	GSM226533	L3SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
7.5	98.8	GSM252692	Section of Root from 270 mm to 340 mm harvested immediately rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
7.1	98.8	GSM311284	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
7.1	98.8	GSM252669	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
7.0	98.7	GSM133980	Birnbaum_1-10_StageII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root

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