Specifically-expressed experiments

Gene ID	At4g24050
Gene name	short-chain dehydrogenase/reductase (SDR) family protein
Functional description	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
366.2	100.0	GSM311294	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
216.9	100.0	GSM311293	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
132.4	99.9	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
62.9	99.8	GSM284394	Arabidopsis GCE3	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
58.6	99.8	GSM284392	Arabidopsis GCE1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
58.2	99.8	GSM62703	arf6 arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
57.3	99.8	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
55.1	99.8	GSM253198	RGA-GR-DEX-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
53.0	99.8	GSM62704	arf6 arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
49.2	99.8	GSM245254	4hr MOCK Replicate 1	GSE9702	Identification of putative targets of AP3/PI
48.8	99.8	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
42.2	99.8	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.7	99.8	GSM284393	Arabidopsis GCE2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
36.8	99.7	GSM311281	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
31.0	99.7	GSM284396	Arabidopsis GPSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
27.5	99.7	GSM253196	RGA-GR-DEX-REP2	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
25.1	99.6	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
22.3	99.6	GSM245256	4hr MOCK Replicate 3	GSE9702	Identification of putative targets of AP3/PI
21.7	99.6	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.5	99.6	GSM253197	RGA-GR-MOCK-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
21.4	99.6	GSM284395	Arabidopsis GPSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
19.3	99.6	GSM311280	Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
18.6	99.5	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.8	99.5	GSM242961	Mock day 7 (day7E1)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
16.6	99.5	ArrayExpress	E-MEXP-1592-raw-cel-1617526960	-	-	-
16.3	99.5	ArrayExpress	E-MEXP-1592-raw-cel-1617526968	-	-	-
16.1	99.5	GSM47019	Ler 9	GSE2473	Small RNA biogenesis mutants
15.9	99.5	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
15.8	99.5	GSM106920	opr3_OPDA_0.5 hr_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
15.8	99.5	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.9	99.4	ArrayExpress	E-MEXP-1592-raw-cel-1617526864	-	-	-
14.4	99.4	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
14.2	99.4	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.8	99.4	GSM311279	Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
13.6	99.4	GSM62693	arf6 arf8 flowers_stage 1-14_IAA	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
13.0	99.4	GSM62694	Columbia flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
12.9	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519902871	-	-	-
12.9	99.3	GSM62692	arf6 arf8 flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
12.8	99.3	GSM242962	Mock day 7 (day7E2)	GSE9605	Target genes of AGAMOUS during early flower development in Arabidopsis
12.7	99.3	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.7	99.3	GSM106924	opr3_OPDA_2 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
12.7	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526936	-	-	-
12.5	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526928	-	-	-
12.2	99.3	GSM106970	opr3_OPDA_22 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.7	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526896	-	-	-
11.5	99.3	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
11.4	99.3	GSM253194	RGA-GR-DEX-REP1	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
11.3	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526872	-	-	-
11.2	99.2	GSM47017	Ler 7	GSE2473	Small RNA biogenesis mutants
11.0	99.2	GSM133748	Turner_A-2-Turne-Mut-Top2_SLD	GSE5729	Role of COV in vascular patterning
11.0	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526848	-	-	-
10.9	99.2	GSM106966	opr3_OPDA_8 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.8	99.2	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.7	99.2	GSM131591	ATGE_36_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.4	99.2	ArrayExpress	E-MEXP-1112-raw-cel-1590665741	-	-	-
10.3	99.2	GSM106923	opr3_OPDA_2 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.3	99.2	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.1	99.2	GSM226273	YHB_Dark_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.1	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519903415	-	-	-
10.0	99.2	GSM134301	Penfield_1-3_endosperm-control_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
10.0	99.2	GSM226276	WT(Ler)_Rc15_replicate1	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.0	99.2	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.9	99.1	GSM128729	Hennig_1-1_flower-buds-CK_021114_1_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
9.6	99.1	ArrayExpress	E-MEXP-1112-raw-cel-1590665325	-	-	-
9.6	99.1	GSM62691	arf6/arf6 ARF8/arf8 flowers_stage 1-14_IAA	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
9.4	99.1	GSM253193	RGA-GR-MOCK-REP1	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
9.4	99.1	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.4	99.1	GSM106828	opr3_0 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.4	99.1	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.3	99.1	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.1	99.1	GSM106908	opr3_JA_0.5 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1	99.1	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
9.0	99.1	GSM106921	opr3_OPDA_0.5 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.0	99.1	GSM317519	Apex_5DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
9.0	99.1	GSM131597	ATGE_39_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.9	99.0	ArrayExpress	E-ATMX-31-raw-cel-1516948018	-	-	-
8.8	99.0	GSM131593	ATGE_36_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.8	99.0	GSM106833	opr3_JA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.8	99.0	ArrayExpress	Capper_1-10_E6_water	-	-	-
8.8	99.0	GSM62702	arf6 arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
8.7	99.0	GSM106967	opr3_OPDA_22 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7	99.0	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.6	99.0	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1

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