Specifically-expressed experiments

Gene ID	At4g23590
Gene name	aminotransferase class I and II family protein
Functional description	F:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPMAF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
328.2	100.0	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
311.4	100.0	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
306.1	100.0	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
288.8	100.0	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
284.5	100.0	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
259.7	100.0	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
256.4	100.0	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
242.5	100.0	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
198.2	100.0	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
186.3	100.0	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
182.7	100.0	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
171.1	100.0	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
111.7	99.9	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
101.5	99.9	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
97.8	99.9	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
83.8	99.9	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
80.8	99.9	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
76.6	99.9	GSM133975	Birnbaum_1-5_StageI-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
69.8	99.9	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
68.3	99.9	GSM133974	Birnbaum_1-4_StageI-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
63.0	99.8	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
60.9	99.8	GSM133991	Birnbaum_1-24_gl2-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
60.4	99.8	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
45.4	99.8	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
42.6	99.8	GSM252688	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
42.2	99.8	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
40.4	99.8	GSM265415	Arabidopsis, root cells, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
36.5	99.7	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
36.3	99.7	GSM133977	Birnbaum_1-7_StageI-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
34.5	99.7	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
34.4	99.7	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.5	99.7	GSM133976	Birnbaum_1-6_StageI-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
21.7	99.6	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
21.5	99.6	GSM252682	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
21.5	99.6	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
21.0	99.6	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.8	99.6	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
19.6	99.6	GSM184479	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.4	99.6	GSM252679	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
18.6	99.5	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
18.6	99.5	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.6	99.5	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.1	99.5	GSM252685	Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
18.0	99.5	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.6	99.5	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.2	99.5	GSM252689	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
16.8	99.5	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
16.3	99.5	GSM252687	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
15.8	99.5	GSM252678	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
15.1	99.4	GSM265427	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.6	99.4	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
14.2	99.4	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.6	99.4	GSM252666	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
13.5	99.4	GSM252677	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
12.8	99.3	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.3	99.3	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.5	99.2	GSM184552	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.1	99.2	GSM252683	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep5	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
9.3	99.1	GSM131108	Broadley_1-6_A6-Bo+P3-nutrient-replete_Rep3_ATH1	GSE5614	Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
9.0	99.1	GSM184481	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.7	99.0	GSM226543	Slice1JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
8.7	99.0	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root

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