CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At4g22570

Gene name APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)

Functional description Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.2 99.7 GSM133818 Yang_1-3_young-pod_Rep2_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
19.4 99.6 GSM131587 ATGE_34_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
18.6 99.5 GSM318332 ML_35DAS_1 GSE12676 Arabidopsis thaliana Ler developmental series
17.9 99.5 GSM131586 ATGE_34_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
17.7 99.5 GSM133820 Yang_1-5_young-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
17.5 99.5 GSM131585 ATGE_34_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
17.3 99.5 GSM27360 WT Rosette Leaf GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
17.3 99.5 GSM62699 arf6/arf6 ARF8/arf8 flowers_stage 11-12 GSE2848 Auxin Response Factor mediated flower gene expression
17.1 99.5 GSM133816 Yang_1-1_young-pod_Rep1_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
16.4 99.5 GSM47019 Ler 9 GSE2473 Small RNA biogenesis mutants
16.3 99.5 GSM133821 Yang_1-6_old-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
15.2 99.4 GSM62698 arf6/arf6 ARF8/arf8 flowers_stage 1-10 GSE2848 Auxin Response Factor mediated flower gene expression
15.2 99.4 GSM131541 ATGE_26_B GSE5630 AtGenExpress: Developmental series (leaves)
15.0 99.4 ArrayExpress E-MEXP-1451-raw-cel-1585200266 - - -
14.4 99.4 GSM318345 ML_35DAS_2 GSE12676 Arabidopsis thaliana Ler developmental series
14.3 99.4 ArrayExpress E-MEXP-1474-raw-cel-1593932897 - - -
14.2 99.4 GSM131540 ATGE_26_A GSE5630 AtGenExpress: Developmental series (leaves)
13.4 99.4 GSM131657 ATGE_27_C GSE5633 AtGenExpress: Developmental series (shoots and stems)
13.4 99.4 GSM27362 WT Stem GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
13.4 99.4 ArrayExpress E-MEXP-1797-raw-cel-1669767940 - - -
12.9 99.3 ArrayExpress E-MEXP-1797-raw-cel-1669767967 - - -
12.9 99.3 GSM131612 ATGE_45_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
12.7 99.3 GSM131686 ATGE_76_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
12.5 99.3 GSM131596 ATGE_37_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
12.5 99.3 GSM131656 ATGE_27_B GSE5633 AtGenExpress: Developmental series (shoots and stems)
12.5 99.3 ArrayExpress E-MEXP-1592-raw-cel-1617527000 - - -
12.5 99.3 GSM260957 A5-LLOYD-CON_REP2 GSE10326 Transcriptome analysis of pho3
12.4 99.3 GSM27366 lec1-1 Stem GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
12.3 99.3 ArrayExpress E-MEXP-1592-raw-cel-1617526864 - - -
12.2 99.3 GSM131594 ATGE_37_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
12.1 99.3 GSM27364 lec1-1 Rosette Leaf GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
12.1 99.3 ArrayExpress E-MEXP-1451-raw-cel-1585200362 - - -
12.1 99.3 GSM131542 ATGE_26_C GSE5630 AtGenExpress: Developmental series (leaves)
12.1 99.3 GSM131613 ATGE_45_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
12.1 99.3 GSM131614 ATGE_45_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
12.0 99.3 GSM62704 arf6 arf8 flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression
12.0 99.3 GSM133819 Yang_1-4_old-pod_Rep2_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
12.0 99.3 GSM131655 ATGE_27_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
11.9 99.3 GSM131595 ATGE_37_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
11.7 99.3 GSM131687 ATGE_76_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
11.6 99.3 GSM131628 ATGE_57_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
11.5 99.3 GSM131598 ATGE_39_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
11.5 99.3 ArrayExpress E-MEXP-1474-raw-cel-1593932801 - - -
11.4 99.3 GSM62696 Columbia flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression
11.3 99.3 GSM131685 ATGE_76_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
11.2 99.2 ArrayExpress E-MEXP-1451-raw-cel-1585200170 - - -
11.0 99.2 GSM131597 ATGE_39_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
11.0 99.2 ArrayExpress E-MEXP-1592-raw-cel-1617526872 - - -
11.0 99.2 ArrayExpress E-MEXP-1451-raw-cel-1585200202 - - -
11.0 99.2 GSM131599 ATGE_39_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
11.0 99.2 ArrayExpress E-MEXP-1454-raw-cel-1585858145 - - -
10.8 99.2 ArrayExpress E-MEXP-1592-raw-cel-1617526960 - - -
10.7 99.2 GSM244443 Arabidopsis wild-type_T0 (not inoculated)_biological rep2_exp2 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.7 99.2 ArrayExpress E-MEXP-1797-raw-cel-1669768030 - - -
10.7 99.2 GSM131629 ATGE_57_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
10.5 99.2 ArrayExpress E-MEXP-1592-raw-cel-1617526928 - - -
10.5 99.2 ArrayExpress E-MEXP-1474-raw-cel-1593932865 - - -
10.5 99.2 GSM131615 ATGE_53_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
10.4 99.2 GSM62695 Columbia flowers_stage 11-12 GSE2848 Auxin Response Factor mediated flower gene expression
10.2 99.2 ArrayExpress E-MEXP-285-raw-cel-440783213 - - -
10.1 99.2 GSM131627 ATGE_57_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
10.1 99.2 ArrayExpress E-MEXP-1592-raw-cel-1617526832 - - -
10.0 99.2 ArrayExpress E-MEXP-1474-raw-cel-1593932769 - - -
10.0 99.2 GSM128730 Hennig_1-2_flowers-CK_021114_2_A_Rep1_ATH1 GSE5526 Transcriptional Programs of Early Reproductive Stages in Arabidopsis
10.0 99.2 GSM131617 ATGE_53_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
9.9 99.1 ArrayExpress E-MEXP-1474-raw-cel-1593932609 - - -
9.9 99.1 ArrayExpress E-MEXP-1451-raw-cel-1585200234 - - -
9.8 99.1 GSM270865 Arabidopsis cell culture, 4 h_control_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
9.8 99.1 GSM131158 AtGen_C-8_2-C-24_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
9.8 99.1 GSM62703 arf6 arf8 flowers_stage 11-12 GSE2848 Auxin Response Factor mediated flower gene expression
9.7 99.1 GSM131616 ATGE_53_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
9.7 99.1 GSM142636 MC002_ATH1_A5.2-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.7 99.1 ArrayExpress E-MEXP-1474-raw-cel-1593932641 - - -
9.6 99.1 GSM128731 Hennig_1-3_siliques-CK_021114_3_A_Rep1_ATH1 GSE5526 Transcriptional Programs of Early Reproductive Stages in Arabidopsis
9.5 99.1 ArrayExpress E-MEXP-285-raw-cel-440783152 - - -
9.4 99.1 ArrayExpress E-MEXP-1592-raw-cel-1617526968 - - -
9.3 99.1 ArrayExpress E-MEXP-1592-raw-cel-1617526992 - - -
9.2 99.1 GSM142637 MC002_ATH1_A5.3-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.1 99.1 GSM142635 MC002_ATH1_A5.1-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.0 99.1 GSM142625 MC002_ATH1_A1.3-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.9 99.0 GSM47032 dcl3-1 22 GSE2473 Small RNA biogenesis mutants
8.8 99.0 ArrayExpress E-MEXP-1474-raw-cel-1593932705 - - -
8.8 99.0 GSM47043 rdr1-1 33 GSE2473 Small RNA biogenesis mutants
8.7 99.0 ArrayExpress E-MEXP-1592-raw-cel-1617526896 - - -
8.7 99.0 GSM253155 end of the night B GSE10016 Expression data of Arabidopsis thaliana rosettes in an extended night
8.7 99.0 ArrayExpress E-MEXP-1474-raw-cel-1593932929 - - -
8.7 99.0 ArrayExpress E-MEXP-1246-raw-cel-1504120291 - - -
8.7 99.0 ArrayExpress E-MEXP-1474-raw-cel-1593932737 - - -
8.6 99.0 GSM77055 00h Col-0 replicate A GSE3416 Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.2	99.7	GSM133818	Yang_1-3_young-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
19.4	99.6	GSM131587	ATGE_34_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
18.6	99.5	GSM318332	ML_35DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
17.9	99.5	GSM131586	ATGE_34_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.7	99.5	GSM133820	Yang_1-5_young-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
17.5	99.5	GSM131585	ATGE_34_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.3	99.5	GSM27360	WT Rosette Leaf	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
17.3	99.5	GSM62699	arf6/arf6 ARF8/arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
17.1	99.5	GSM133816	Yang_1-1_young-pod_Rep1_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
16.4	99.5	GSM47019	Ler 9	GSE2473	Small RNA biogenesis mutants
16.3	99.5	GSM133821	Yang_1-6_old-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
15.2	99.4	GSM62698	arf6/arf6 ARF8/arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
15.2	99.4	GSM131541	ATGE_26_B	GSE5630	AtGenExpress: Developmental series (leaves)
15.0	99.4	ArrayExpress	E-MEXP-1451-raw-cel-1585200266	-	-	-
14.4	99.4	GSM318345	ML_35DAS_2	GSE12676	Arabidopsis thaliana Ler developmental series
14.3	99.4	ArrayExpress	E-MEXP-1474-raw-cel-1593932897	-	-	-
14.2	99.4	GSM131540	ATGE_26_A	GSE5630	AtGenExpress: Developmental series (leaves)
13.4	99.4	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.4	99.4	GSM27362	WT Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
13.4	99.4	ArrayExpress	E-MEXP-1797-raw-cel-1669767940	-	-	-
12.9	99.3	ArrayExpress	E-MEXP-1797-raw-cel-1669767967	-	-	-
12.9	99.3	GSM131612	ATGE_45_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.7	99.3	GSM131686	ATGE_76_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
12.5	99.3	GSM131596	ATGE_37_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.5	99.3	GSM131656	ATGE_27_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
12.5	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617527000	-	-	-
12.5	99.3	GSM260957	A5-LLOYD-CON_REP2	GSE10326	Transcriptome analysis of pho3
12.4	99.3	GSM27366	lec1-1 Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
12.3	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526864	-	-	-
12.2	99.3	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.1	99.3	GSM27364	lec1-1 Rosette Leaf	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
12.1	99.3	ArrayExpress	E-MEXP-1451-raw-cel-1585200362	-	-	-
12.1	99.3	GSM131542	ATGE_26_C	GSE5630	AtGenExpress: Developmental series (leaves)
12.1	99.3	GSM131613	ATGE_45_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.1	99.3	GSM131614	ATGE_45_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.0	99.3	GSM62704	arf6 arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
12.0	99.3	GSM133819	Yang_1-4_old-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
12.0	99.3	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.9	99.3	GSM131595	ATGE_37_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.7	99.3	GSM131687	ATGE_76_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
11.6	99.3	GSM131628	ATGE_57_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.5	99.3	GSM131598	ATGE_39_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.5	99.3	ArrayExpress	E-MEXP-1474-raw-cel-1593932801	-	-	-
11.4	99.3	GSM62696	Columbia flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
11.3	99.3	GSM131685	ATGE_76_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
11.2	99.2	ArrayExpress	E-MEXP-1451-raw-cel-1585200170	-	-	-
11.0	99.2	GSM131597	ATGE_39_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.0	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526872	-	-	-
11.0	99.2	ArrayExpress	E-MEXP-1451-raw-cel-1585200202	-	-	-
11.0	99.2	GSM131599	ATGE_39_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.0	99.2	ArrayExpress	E-MEXP-1454-raw-cel-1585858145	-	-	-
10.8	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526960	-	-	-
10.7	99.2	GSM244443	Arabidopsis wild-type_T0 (not inoculated)_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.7	99.2	ArrayExpress	E-MEXP-1797-raw-cel-1669768030	-	-	-
10.7	99.2	GSM131629	ATGE_57_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.5	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526928	-	-	-
10.5	99.2	ArrayExpress	E-MEXP-1474-raw-cel-1593932865	-	-	-
10.5	99.2	GSM131615	ATGE_53_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.4	99.2	GSM62695	Columbia flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
10.2	99.2	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
10.1	99.2	GSM131627	ATGE_57_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.1	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526832	-	-	-
10.0	99.2	ArrayExpress	E-MEXP-1474-raw-cel-1593932769	-	-	-
10.0	99.2	GSM128730	Hennig_1-2_flowers-CK_021114_2_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
10.0	99.2	GSM131617	ATGE_53_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.9	99.1	ArrayExpress	E-MEXP-1474-raw-cel-1593932609	-	-	-
9.9	99.1	ArrayExpress	E-MEXP-1451-raw-cel-1585200234	-	-	-
9.8	99.1	GSM270865	Arabidopsis cell culture, 4 h_control_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
9.8	99.1	GSM131158	AtGen_C-8_2-C-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
9.8	99.1	GSM62703	arf6 arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
9.7	99.1	GSM131616	ATGE_53_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.7	99.1	GSM142636	MC002_ATH1_A5.2-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.7	99.1	ArrayExpress	E-MEXP-1474-raw-cel-1593932641	-	-	-
9.6	99.1	GSM128731	Hennig_1-3_siliques-CK_021114_3_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
9.5	99.1	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-1592-raw-cel-1617526968	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-1592-raw-cel-1617526992	-	-	-
9.2	99.1	GSM142637	MC002_ATH1_A5.3-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.1	99.1	GSM142635	MC002_ATH1_A5.1-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.0	99.1	GSM142625	MC002_ATH1_A1.3-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.9	99.0	GSM47032	dcl3-1 22	GSE2473	Small RNA biogenesis mutants
8.8	99.0	ArrayExpress	E-MEXP-1474-raw-cel-1593932705	-	-	-
8.8	99.0	GSM47043	rdr1-1 33	GSE2473	Small RNA biogenesis mutants
8.7	99.0	ArrayExpress	E-MEXP-1592-raw-cel-1617526896	-	-	-
8.7	99.0	GSM253155	end of the night B	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
8.7	99.0	ArrayExpress	E-MEXP-1474-raw-cel-1593932929	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-1246-raw-cel-1504120291	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-1474-raw-cel-1593932737	-	-	-
8.6	99.0	GSM77055	00h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves

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Gene ID	At4g22570
Gene name	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)
Functional description	Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.