Specifically-expressed experiments

Gene ID	At4g21600
Gene name	ENDO5 (endonuclease 5)
Functional description	Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
37.8	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.7	99.7	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
29.6	99.7	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
25.8	99.7	GSM157314	Hammond_3-4_Control-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
25.4	99.6	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
25.4	99.6	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
25.1	99.6	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
25.0	99.6	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
22.7	99.6	GSM134514	Col-0_4day_dark_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
20.5	99.6	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
19.8	99.6	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
19.5	99.6	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
18.3	99.5	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
17.9	99.5	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
17.5	99.5	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
17.4	99.5	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
16.4	99.5	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
16.0	99.5	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
15.9	99.5	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.6	99.5	GSM184489	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.4	99.5	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
15.1	99.4	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
15.1	99.4	GSM265415	Arabidopsis, root cells, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.8	99.4	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.6	99.4	GSM179967	Arabidopsis aux1 mutant roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.5	99.4	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.1	99.4	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
14.0	99.4	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.8	99.4	GSM133129	S0_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
13.5	99.4	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
13.5	99.4	GSM266676	Arabidopsis, root cells, stele, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
13.4	99.4	GSM142724	CH001_ATH1_A003-Hampt-c4a_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
13.3	99.4	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.3	99.4	GSM184490	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.3	99.4	GSM142728	CH001_ATH1_A007-Hampt-c4b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
13.2	99.4	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
13.2	99.4	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
13.1	99.4	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
13.0	99.4	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
12.8	99.3	GSM134517	Col-0_4day_red illumination_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
12.8	99.3	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.7	99.3	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
12.7	99.3	GSM291024	root - 08% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.5	99.3	GSM142727	CH001_ATH1_A006-Hampt-akb	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
12.5	99.3	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.4	99.3	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.2	99.3	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
12.1	99.3	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.0	99.3	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
11.9	99.3	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.9	99.3	GSM142726	CH001_ATH1_A005-Hampt-wsb_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.8	99.3	GSM142733	CH001_ATH1_A012-Hampt-c1c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.8	99.3	GSM179974	Arabidopsis roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.7	99.3	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.6	99.3	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.5	99.3	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.4	99.3	GSM134518	Col-0_4day_red illumination_-lincomycin_rep2	GSE5759	red illumination w/o lincomycin
11.4	99.3	GSM184479	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.3	99.3	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.2	99.2	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.2	99.2	GSM142730	CH001_ATH1_A009-Hampt-wsc_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.1	99.2	GSM131565	ATGE_94_B	GSE5631	AtGenExpress: Developmental series (roots)
11.1	99.2	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
11.1	99.2	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
11.0	99.2	GSM252688	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
10.9	99.2	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.9	99.2	GSM179973	Arabidopsis roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.8	99.2	GSM252679	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
10.8	99.2	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
10.8	99.2	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
10.8	99.2	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.7	99.2	GSM260880	Yap_A1-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
10.6	99.2	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.6	99.2	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.5	99.2	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
10.5	99.2	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
10.5	99.2	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.5	99.2	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
10.5	99.2	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
10.5	99.2	GSM157327	Hammond_3-11_Potassium-starved-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.4	99.2	GSM142721	CH001_ATH1_A001-Hampt-wsa	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
10.3	99.2	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
10.3	99.2	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.3	99.2	GSM142669	SF002_ATH1_A7-Fille-ANGR4-12nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
10.2	99.2	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
10.1	99.2	GSM131555	ATGE_3_A	GSE5631	AtGenExpress: Developmental series (roots)
10.1	99.2	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.1	99.2	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.1	99.2	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
10.0	99.2	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.0	99.2	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.0	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922572	-	-	-
9.9	99.1	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.9	99.1	GSM142675	SF002_ATH1_A6-Fille-WT+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.8	99.1	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.8	99.1	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.7	99.1	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
9.7	99.1	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.7	99.1	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.7	99.1	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.7	99.1	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.7	99.1	GSM133140	S1500_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.6	99.1	GSM131557	ATGE_3_C	GSE5631	AtGenExpress: Developmental series (roots)
9.6	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922987	-	-	-
9.6	99.1	GSM9603	iaa17-6_control_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.5	99.1	GSM131556	ATGE_3_B	GSE5631	AtGenExpress: Developmental series (roots)
9.5	99.1	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.5	99.1	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.4	99.1	GSM133128	S0_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.4	99.1	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.4	99.1	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.3	99.1	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.3	99.1	GSM291128	root - 08% oxygen - 48h - B	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.3	99.1	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.3	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
9.3	99.1	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
9.3	99.1	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.2	99.1	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
9.2	99.1	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.2	99.1	GSM131562	ATGE_93_B	GSE5631	AtGenExpress: Developmental series (roots)
9.1	99.1	GSM226531	L1SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.0	99.1	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.0	99.1	GSM142671	SF001_ATH1_A1-Fille-WT-nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.0	99.1	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.0	99.1	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.0	99.1	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM142673	SF001_ATH1_A3-Fille-ANGR4-12	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
8.9	99.0	GSM131558	ATGE_9_A	GSE5631	AtGenExpress: Developmental series (roots)
8.8	99.0	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
8.8	99.0	GSM27365	lec1-1 Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
8.8	99.0	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.7	99.0	ArrayExpress	E-MEXP-828-raw-cel-1156922368	-	-	-
8.7	99.0	GSM142672	SF001_ATH1_A2-Fille-WT-+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
8.7	99.0	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
8.6	99.0	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.

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