Specifically-expressed experiments

Gene ID At4g21380
Gene name ARK3 (A. THALIANA RECEPTOR KINASE 3)
Functional description encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
64.799.8GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
63.399.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
63.099.8GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
52.799.8GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
51.299.8GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
49.099.8GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
44.799.8GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
40.899.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
38.499.8GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
38.399.8GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
36.499.7GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
35.099.7GSM131141AtGen_B-27_2-6-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
33.999.7GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
33.199.7GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.499.7GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.799.7ArrayExpressE-MEXP-546-raw-cel-863289586---
31.099.7GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
30.899.7GSM131125AtGen_B-11_1-4-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
29.399.7ArrayExpressE-MEXP-739-raw-cel-1099467240---
29.199.7GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
28.799.7GSM131126AtGen_B-12_1-5-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
26.599.7GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
24.999.6ArrayExpressE-MEXP-739-raw-cel-1099467276---
24.499.6GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
24.099.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
23.799.6GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
23.299.6ArrayExpressE-NASC-76-raw-cel-1359878976---
22.799.6ArrayExpressE-MEXP-739-raw-cel-1099467267---
21.299.6GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
20.899.6GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
20.699.6GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.999.6ArrayExpressE-MEXP-739-raw-cel-1099467249---
19.799.6GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
19.599.6GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.499.6ArrayExpressE-ATMX-6-raw-cel-1308219081---
18.999.5GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
18.599.5GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.299.5GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.699.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.499.5GSM260955A2-LLOYD-PHO_REP2GSE10326Transcriptome analysis of pho3Link to GEO
17.499.5GSM134341St.Clair_1-2_331_Col-0_0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
17.499.5GSM131138AtGen_B-24_2-3-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
17.199.5GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
17.199.5ArrayExpressE-MEXP-1443-raw-cel-1581869921---
16.899.5GSM131122AtGen_B-8_1-1-4_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
16.699.5GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.699.5ArrayExpressE-MEXP-546-raw-cel-863289532---
16.499.5GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.299.5GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
16.099.5GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.999.5GSM131124AtGen_B-10_1-3-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.999.5ArrayExpressE-MEXP-546-raw-cel-863289404---
15.799.5GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.799.5GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.499.5GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
14.999.4GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.599.4GSM131137AtGen_B-23_2-2-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
14.599.4GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
14.499.4GSM131123AtGen_B-9_1-2-4_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
14.399.4GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
14.299.4GSM133074JD AT+EO COL WT 04D UNINFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
13.899.4GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.899.4GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.599.4ArrayExpressE-MEXP-739-raw-cel-1099467258---
13.499.4GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.299.4GSM133076JD AT+EO COL WT 05D UNINFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
13.199.4GSM131156AtGen_C-6_3-C-12_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
13.199.4GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
12.999.3GSM133086JD AT+EO COL WT EXP2 02D UNINFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
12.899.3GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.599.3ArrayExpressE-MEXP-546-raw-cel-863289424---
12.599.3GSM1330502791GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
12.599.3GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
12.499.3GSM133099JD AT+EO COL WT EXP2 24H INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
12.499.3GSM269828WT leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
12.399.3GSM1330512793GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
12.299.3ArrayExpressE-NASC-76-raw-cel-1359879158---
12.199.3GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
12.199.3ArrayExpressE-MEXP-1443-raw-cel-1581869632---
12.199.3ArrayExpressE-MEXP-1443-raw-cel-1581869863---
12.199.3GSM131128AtGen_B-14_1-7-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.999.3ArrayExpressE-MEXP-739-raw-cel-1099467303---
11.999.3GSM133091JD AT+EO COL WT EXP2 05D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
11.899.3GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.899.3GSM131110AtGen_B-38_3-3-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.799.3GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
11.699.3GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
11.599.3GSM269832T8 leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
11.399.3GSM133087JD AT+EO COL WT EXP2 03D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
11.299.2GSM260953A1-LLOYD-PHO_REP1GSE10326Transcriptome analysis of pho3Link to GEO
11.299.2GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.099.2GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2ArrayExpressE-NASC-76-raw-cel-1359878900---
10.899.2GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
10.899.2ArrayExpressE-MEXP-739-raw-cel-1099467330---
10.899.2ArrayExpressE-MEXP-809-raw-cel-1123684107---
10.799.2GSM131142AtGen_B-28_2-7-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.799.2GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.799.2GSM133089JD AT+EO COL WT EXP2 04D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
10.599.2GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.499.2GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.499.2ArrayExpressE-MEXP-546-raw-cel-863289450---
10.399.2GSM134345St.Clair_1-6_398_Col-0_0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
10.299.2GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.199.2ArrayExpressE-MEXP-739-raw-cel-1099467312---
10.199.2GSM1330532794GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.099.2ArrayExpressE-MEXP-546-raw-cel-863289506---
9.899.1ArrayExpressE-MEXP-509-raw-cel-829148666---
9.899.1GSM1330642528GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.799.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.799.1GSM134346St.Clair_1-7_273b_Col-0_0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
9.699.1ArrayExpressE-MEXP-711-raw-cel-1563002902---
9.699.1GSM131114AtGen_B-42_3-7-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.599.1GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.499.1GSM1330542796GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.399.1ArrayExpressE-MEXP-739-raw-cel-1099467294---
9.399.1GSM134343St.Clair_1-4_284b_Col-0_0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
9.299.1GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.199.1GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.199.1GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.099.1GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.099.1GSM133088JD AT+EO COL WT EXP2 03D UNINFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
8.999.0GSM264766paraquat 20mM 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
8.999.0GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.899.0ArrayExpressE-ATMX-6-raw-cel-1308219150---
8.799.0GSM133069JD AT+EO COL WT 02D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
8.799.0GSM133085JD AT+EO COL WT EXP2 02D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
8.699.0GSM269814T6 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
8.699.0GSM157301JPritchard_A-3_CTR_Rep3_ATH1GSE6823The molecular basis of plant insect interactionsLink to GEO



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