Specifically-expressed experiments

Gene ID At4g21070
Gene name ATBRCA1
Functional description Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
711.2100.0GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
298.4100.0GSM133947Murray_2-3_T4-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
213.9100.0ArrayExpressE-ATMX-35-raw-cel-1574334832---
213.6100.0GSM133949Murray_2-5_T8-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
207.7100.0GSM133948Murray_2-4_T6-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
176.0100.0GSM133950Murray_2-6_T10-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
155.899.9GSM245913csn5 (csn5a-2 csn5b) mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
140.499.9GSM245910csn3-1 mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
135.699.9GSM245915csn5 (csn5a-2 csn5b) mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
132.399.9GSM133952Murray_2-8_T14-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
126.899.9GSM245914csn5 (csn5a-2 csn5b) mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
118.599.9GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
104.299.9GSM133951Murray_2-7_T12-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
102.399.9ArrayExpressE-ATMX-35-raw-cel-1574334816---
97.099.9GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysisLink to GEO
89.599.9GSM245912csn3-1 mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
88.799.9GSM245911csn3-1 mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
84.199.9GSM142885CW001_ATH1_A1.4-WestC-kubGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
84.099.9GSM131375AtGen_6-5511_Genotoxicstress-Shoots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
67.699.9GSM133953Murray_2-9_T16-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
66.599.8GSM131369AtGen_6-5321_Genotoxicstress-Roots-3.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
63.199.8ArrayExpressE-ATMX-35-raw-cel-1574334800---
51.899.8GSM128753De Veylder_1-5_E2Fa-Dpa_Rep1_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
50.499.8GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
49.099.8GSM131372AtGen_6-5412_Genotoxicstress-Shoots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
47.799.8GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
47.599.8GSM88049csn4-1_mutant replicate 1GSE3865CSN4-1 mutant analysisLink to GEO
45.599.8GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
41.599.8GSM128756De Veylder_1-8_E2Fa-Dpa_Rep4_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
41.499.8GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
41.199.8GSM131374AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
38.899.8GSM131370AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
38.499.8GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
35.999.7GSM142883CW001_ATH1_A1.2-WestC-wsbGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
35.699.7GSM131376AtGen_6-5512_Genotoxicstress-Shoots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
34.699.7GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
34.699.7GSM245925csn5 (csn5a-2 csn5b) mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
32.599.7GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
29.199.7GSM131371AtGen_6-5411_Genotoxicstress-Shoots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
27.699.7GSM128755De Veylder_1-7_E2Fa-Dpa_Rep3_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
21.099.6GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
20.799.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
19.999.6GSM245921csn3-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
18.999.5GSM128754De Veylder_1-6_E2Fa-Dpa_Rep2_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
18.199.5GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
16.999.5GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.599.5GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.999.5GSM245922csn4-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
15.799.5GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
15.499.5GSM245920csn3-1 mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
15.399.4GSM245926csn5 (csn5a-2 csn5b) mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
15.299.4GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
15.299.4GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.099.4GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
14.999.4GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.399.4GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.999.4GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.699.4GSM88050csn4-1_mutant replicate 2GSE3865CSN4-1 mutant analysisLink to GEO
13.599.4GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.099.4GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.599.3GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.099.3GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.899.3GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.599.3GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.499.3GSM245927csn5 (csn5a-2 csn5b) mutant dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.499.3GSM245924csn4-1_mutant_dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.199.2GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
10.799.2GSM245923csn4-1_mutant_dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
10.699.2GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.399.2GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
8.899.0GSM131368AtGen_6-5312_Genotoxicstress-Shoots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO



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