Specifically-expressed experiments

Gene ID At4g20380
Gene name zinc finger protein (LSD1)
Functional description LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
82.099.9ArrayExpressE-MEXP-285-raw-cel-440782791---
73.799.9ArrayExpressE-MEXP-285-raw-cel-440782725---
73.699.9GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
64.299.8GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
62.399.8GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
54.699.8GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
49.599.8ArrayExpressE-MEXP-1138-raw-cel-1432772522---
48.299.8GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
46.299.8ArrayExpressE-MEXP-1138-raw-cel-1432773066---
45.199.8GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesisLink to GEO
44.099.8GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
41.699.8ArrayExpressE-MEXP-1138-raw-cel-1432772906---
40.699.8ArrayExpressE-MEXP-1138-raw-cel-1432772682---
39.399.8ArrayExpressE-MEXP-1138-raw-cel-1432772714---
38.899.8ArrayExpressE-MEXP-1138-raw-cel-1432772554---
38.599.8ArrayExpressE-MEXP-1138-raw-cel-1432772970---
37.999.8ArrayExpressE-MEXP-1138-raw-cel-1432772938---
37.699.7ArrayExpressE-MEXP-1138-raw-cel-1432772810---
37.099.7ArrayExpressE-ATMX-35-raw-cel-1574334880---
36.799.7ArrayExpressE-MEXP-1138-raw-cel-1432772746---
36.099.7ArrayExpressE-ATMX-35-raw-cel-1574334864---
35.899.7ArrayExpressE-MEXP-1138-raw-cel-1432772778---
34.999.7GSM154505Arabidopsis hydrated pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
34.799.7ArrayExpressE-MEXP-1138-raw-cel-1432772586---
34.599.7ArrayExpressE-MEXP-1138-raw-cel-1432773002---
32.899.7GSM154506Arabidopsis hydrated pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
32.199.7ArrayExpressE-MEXP-1138-raw-cel-1432772874---
32.199.7ArrayExpressE-MEXP-1138-raw-cel-1432772618---
31.899.7ArrayExpressE-MEXP-1138-raw-cel-1432773162---
30.799.7ArrayExpressE-MEXP-1138-raw-cel-1432772650---
30.699.7ArrayExpressE-MEXP-1138-raw-cel-1432773130---
29.899.7ArrayExpressE-MEXP-1138-raw-cel-1432773034---
28.299.7ArrayExpressE-MEXP-1138-raw-cel-1432772842---
27.699.7ArrayExpressE-MEXP-1138-raw-cel-1432773226---
26.399.7ArrayExpressE-MEXP-1138-raw-cel-1432773354---
25.899.7GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
25.499.6ArrayExpressE-MEXP-1138-raw-cel-1432773194---
23.799.6ArrayExpressE-MEXP-1138-raw-cel-1432773322---
23.599.6ArrayExpressE-MEXP-1138-raw-cel-1432773098---
20.799.6ArrayExpressE-MEXP-1138-raw-cel-1432773290---
18.599.5ArrayExpressE-MEXP-1138-raw-cel-1432773258---
18.599.5GSM239254CaMV::DME stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
17.599.5ArrayExpressE-MEXP-1138-raw-cel-1432773386---
16.199.5GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.599.3GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
12.199.3GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
11.199.2ArrayExpressE-ATMX-35-raw-cel-1574334848---
10.499.2GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.899.1GSM154503Arabidopsis desiccated mature pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
9.199.1GSM131609ATGE_43_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
8.699.0GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO



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