Specifically-expressed experiments

Gene ID At4g19680
Gene name IRT2
Functional description encodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
583.3100.0GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
325.1100.0GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
298.2100.0GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
183.8100.0GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
149.399.9GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
117.099.9GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
85.799.9GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
81.899.9GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
68.599.9GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
65.599.8GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
58.199.8GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
55.999.8GSM133273RIKEN-GODA8A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
54.599.8GSM133259RIKEN-GODA1A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
53.499.8GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
53.099.8GSM265470Arabidopsis, whole roots, -Fe, 24 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
51.799.8GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
48.599.8GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
47.899.8GSM184903Arabidopsis, root cells, stele, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
46.899.8GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
45.399.8GSM133261RIKEN-GODA2A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
42.399.8GSM265469Arabidopsis, whole roots, -Fe, 24 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
42.399.8ArrayExpressE-MEXP-722-raw-cel-1062243470---
39.999.8GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
38.699.8GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
38.099.8GSM133269RIKEN-GODA6A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
37.099.7GSM265461Arabidopsis, whole roots, standard conditions, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
36.599.7GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
35.899.7GSM133275RIKEN-GODA9A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
35.099.7GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
34.799.7GSM133264RIKEN-GODA3B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
34.699.7ArrayExpressE-MEXP-722-raw-cel-1062243559---
32.799.7GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
31.199.7GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
30.499.7ArrayExpressE-MEXP-1304-raw-cel-1530617900---
29.799.7GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
27.899.7GSM133251RIKEN-GODA10A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
27.899.7GSM133263RIKEN-GODA3A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
27.099.7GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
26.699.7GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
25.999.7GSM133276RIKEN-GODA9B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
25.999.7GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
25.499.6GSM133267RIKEN-GODA5A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
25.099.6GSM133268RIKEN-GODA5B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
24.999.6GSM265468Arabidopsis, whole roots, -Fe, 12 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
24.899.6GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
24.499.6GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
23.799.6GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.799.6GSM133265RIKEN-GODA4A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.599.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.299.6GSM133274RIKEN-GODA8B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
21.999.6ArrayExpressE-MEXP-722-raw-cel-1062243516---
21.799.6GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
21.399.6GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.699.6GSM133262RIKEN-GODA2B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
20.599.6GSM133279RIKEN-GODA2A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
20.599.6ArrayExpressE-MEXP-1304-raw-cel-1530618068---
20.599.6GSM265462Arabidopsis, whole roots, standard conditions, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
19.899.6ArrayExpressE-MEXP-1304-raw-cel-1530617971---
19.699.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.499.6GSM133271RIKEN-GODA7A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
18.799.5ArrayExpressE-MEXP-635-raw-cel-912819840---
18.799.5GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
17.999.5GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
17.799.5GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
17.499.5GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
17.199.5ArrayExpressE-MEXP-635-raw-cel-912819824---
17.099.5GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.799.5GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
16.699.5GSM265466Arabidopsis, whole roots, -Fe, 6 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
16.699.5ArrayExpressE-MEXP-722-raw-cel-1062242948---
16.599.5GSM133260RIKEN-GODA1B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.499.5GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
16.499.5ArrayExpressE-MEXP-1304-raw-cel-1530618003---
16.299.5GSM265464Arabidopsis, whole roots, -Fe, 3 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
16.099.5GSM133281RIKEN-GODA3A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
15.999.5GSM133283RIKEN-GODA4A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
15.699.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.199.4GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
15.199.4ArrayExpressE-MEXP-722-raw-cel-1062243429---
15.199.4GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
15.099.4GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
14.999.4GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
14.599.4GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
14.399.4GSM133277RIKEN-GODA1A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
14.399.4GSM265465Arabidopsis, whole roots, -Fe, 6 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
14.299.4GSM265467Arabidopsis, whole roots, -Fe, 12 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
14.299.4GSM142672SF001_ATH1_A2-Fille-WT-+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
14.299.4GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
14.199.4GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
13.699.4GSM265463Arabidopsis, whole roots, -Fe, 3 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis rootsLink to GEO
12.899.3GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.899.3GSM133284RIKEN-GODA4B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
12.699.3GSM133280RIKEN-GODA2B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
12.399.3GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.099.3GSM142674SF002_ATH1_A5-Fille-WTnodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
12.099.3GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.099.3GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.699.3GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.299.2GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
11.299.2GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.199.2GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
11.099.2GSM133272RIKEN-GODA7B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
10.999.2GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
10.799.2GSM142671SF001_ATH1_A1-Fille-WT-nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.Link to GEO
10.799.2ArrayExpressE-MEXP-722-raw-cel-1062242857---
10.599.2GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.499.2GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
10.399.2GSM133803Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
10.199.2GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.199.2GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.299.1GSM184925Arabidopsis, whole roots, standard conditions, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
8.899.0GSM133282RIKEN-GODA3B-MGSE5697AtGenExpress: Comparison of plant hormone-related mutantsLink to GEO
8.699.0ArrayExpressE-MEXP-1304-raw-cel-1530618104---



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